RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 ZNF385BQ569K4 471 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 COQ5Q5HYK3 327 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 TCTE1Q5JU00 501 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 WASHC2DQ5SRD0 308 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 TMTC4Q5T4D3 741 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 STPG1Q5TH74 334 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 GARNL3Q5VVW2 1013 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 MSANTD1Q6ZTZ1 278 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 ASRGL1Q7L266 308 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 B3GNT8Q7Z7M8 397 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 PDSS2Q86YH6 399 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 MMP21Q8N119 569 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 ACOT4Q8N9L9 421 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 RBM15BQ8NDT2 890 aaKnown RBP6.28□□□□□ -1.4
USP48-208ENST00000479177 OR7A2PQ8NGA2 310 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 OR1L3Q8NH93 324 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 GFM2Q969S9 779 aaKnown RBP6.28□□□□□ -1.4
USP48-208ENST00000479177 VPS33AQ96AX1 596 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 TM4SF18Q96CE8 201 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 ZNF764Q96H86 408 aaPredicted RBP6.28□□□□□ -1.4
USP48-208ENST00000479177 CCDC120Q96HB5 630 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 MAP6Q96JE9 813 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 SERINC2Q96SA4 455 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 CDC6Q99741 560 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 RTKNQ9BST9 563 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 STARD5Q9NSY2 213 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 LYARQ9NX58 379 aaKnown RBP6.28□□□□□ -1.4
USP48-208ENST00000479177 TEX10Q9NXF1 929 aaPredicted RBP6.28□□□□□ -1.4
USP48-208ENST00000479177 MAPRE3Q9UPY8 281 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 WBP11Q9Y2W2 641 aaKnown RBP6.28□□□□□ -1.4
USP48-208ENST00000479177 ASB4Q9Y574 426 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 SLC22A7Q9Y694 548 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 A0A088AWK7 358 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 A0A1W2PP18 115 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 HYKKA2RU49 373 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 ZNF860A6NHJ4 632 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 CCDC154A6NI56 674 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 B2RBV5 119 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 AIM2O14862 343 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 ANGPT2O15123 496 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 FOXS1O43638 330 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 B3GALT2O43825 422 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 RDH16O75452 317 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 RFPL3O75679 317 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 OR2B3O76000 313 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 NSA2O95478 260 aaKnown RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 AIFM1O95831 613 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 IL6P05231 212 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 NR2F6P10588 404 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 LAMP1P11279 417 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 PIM1P11309 404 aaPredicted RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 COX7A2P14406 83 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 RAC2P15153 192 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 ITGAXP20702 1163 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 DDCP20711 480 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 ZNF10P21506 573 aaPredicted RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 PTPN4P29074 926 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 CCKBRP32239 447 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 S100A3P33764 101 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 RPL3P39023 403 aaKnown RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 NUDT2P50583 147 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 MNAT1P51948 309 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 LIMK1P53667 647 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 ITGA1P56199 1179 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 WNT3P56703 355 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 PHC1P78364 1004 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 MC1RQ01726 317 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 TNFRSF17Q02223 184 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 ACY1Q03154 408 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 ZFP36L1Q07352 338 aaKnown RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 STX5Q13190 355 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 SLAMF1Q13291 335 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 ILKQ13418 452 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 TRA2AQ13595 282 aaKnown RBP eCLIP6.27□□□□□ -1.41
USP48-208ENST00000479177 RUNX2Q13950 521 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 GRM7Q14831 915 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 SLC9A5Q14940 896 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 C16orf72Q14CZ0 275 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 NDUFA9Q16795 377 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 TRMT5Q32P41 509 aaKnown RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 PHF19Q5T6S3 580 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 ANKRD26P1Q6NSI1 321 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 SLC2A7Q6PXP3 512 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 HACD2Q6Y1H2 254 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 RBM44Q6ZP01 1051 aaKnown RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 RINLQ6ZS11 566 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 R3HCC1LQ7Z5L2 792 aaKnown RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 TMEM132CQ8N3T6 1108 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 DPP10Q8N608 796 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 TTC29Q8NA56 475 aaPredicted RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 RCBTB1Q8NDN9 531 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 BHLHE22Q8NFJ8 381 aaPredicted RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 OR8J2Q8NGG1 315 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 N4BP2L2Q92802 583 aaPredicted RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 PPCDCQ96CD2 204 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 ZNF501Q96CX3 271 aaPredicted RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 COQ8BQ96D53 544 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 MTERF3Q96E29 417 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 NPAS2Q99743 824 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 MAPKAP1Q9BPZ7 522 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms