RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ITM2AO43736 263 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 SKAP2O75563 359 aaPredicted RBP19.07■□□□□ 0.64
VARS-224ENST00000479051 CPMP14384 443 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 MAPK1P28482 360 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 RPL38P63173 70 aaKnown RBP19.07■□□□□ 0.64
VARS-224ENST00000479051 ZNF267Q14586 743 aaPredicted RBP19.07■□□□□ 0.64
VARS-224ENST00000479051 PLEKHN1Q494U1 663 aaPredicted RBP19.07■□□□□ 0.64
VARS-224ENST00000479051 GALNTL6Q49A17 601 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 COLEC12Q5KU26 742 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 IKBIPQ70UQ0 350 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 GALNT12Q8IXK2 581 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 HORMAD2Q8N7B1 307 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 SH3GL2Q99962 352 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 EPN3Q9H201 632 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 MYNNQ9NPC7 610 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 MIEF1Q9NQG6 463 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 EHD3Q9NZN3 535 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 LUZP4Q9P127 313 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 CES1P1Q9UKY3 287 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 ENTPD4Q9Y227 616 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 CPAMD8Q8IZJ3 1885 aa19.07■□□□□ 0.64
VARS-224ENST00000479051 HMGB1P1B2RPK0 211 aaPredicted RBP19.06■□□□□ 0.64
VARS-224ENST00000479051 LSM1O15116 133 aaKnown RBP19.06■□□□□ 0.64
VARS-224ENST00000479051 SORBS2O94875 1100 aaKnown RBP19.06■□□□□ 0.64
VARS-224ENST00000479051 NT5EP21589 574 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 TNFSF10P50591 281 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 RPL14P50914 215 aaKnown RBP19.06■□□□□ 0.64
VARS-224ENST00000479051 MLF1P58340 268 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 ERVK-8P63133 956 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 OC90Q02509 493 aaPredicted RBP19.06■□□□□ 0.64
VARS-224ENST00000479051 C2orf80Q0P641 193 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 BST1Q10588 318 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 KIAA0040Q15053 153 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 RNF111Q6ZNA4 994 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 MMP21Q8N119 569 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 ARMC10Q8N2F6 343 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 ZNF781Q8N8C0 355 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 OR2T11Q8NH01 316 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 ZNF721Q8TF20 911 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 THAP3Q8WTV1 239 aaPredicted RBP19.06■□□□□ 0.64
VARS-224ENST00000479051 C19orf60Q96EN9 201 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 NPAS2Q99743 824 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 THAP1Q9NVV9 213 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 HEY2Q9UBP5 337 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 ZNF223Q9UK11 482 aaPredicted RBP19.06■□□□□ 0.64
VARS-224ENST00000479051 ERVK-19Q9WJR5 959 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 CSAG2Q9Y5P2 127 aa19.06■□□□□ 0.64
VARS-224ENST00000479051 F10P00742 488 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 DDCP20711 480 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 FEN1P39748 380 aaKnown RBP19.05■□□□□ 0.64
VARS-224ENST00000479051 TLE1Q04724 770 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 TUBA3CQ13748 450 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 ATP6AP1LQ52LC2 224 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 TTMPQ5BVD1 217 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 XKR7Q5GH72 579 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 CES4AQ5XG92 561 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 TUBA3EQ6PEY2 450 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 DGAT2L6Q6ZPD8 337 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 LRRC25Q8N386 305 aaPredicted RBP19.05■□□□□ 0.64
VARS-224ENST00000479051 Q8NA96 180 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 CATSPER1Q8NEC5 780 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 EXOSC8Q96B26 276 aaKnown RBP19.05■□□□□ 0.64
VARS-224ENST00000479051 CXorf21Q9HAI6 301 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 YARS2Q9Y2Z4 477 aaKnown RBP19.05■□□□□ 0.64
VARS-224ENST00000479051 CFAP46Q8IYW2 2715 aa19.05■□□□□ 0.64
VARS-224ENST00000479051 IGKV3-11P04433 115 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 ATP1B1P05026 303 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 CYB561P49447 251 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 RNF4P78317 190 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 PDCD2Q16342 344 aaPredicted RBP19.04■□□□□ 0.64
VARS-224ENST00000479051 RFTN2Q52LD8 501 aaPredicted RBP19.04■□□□□ 0.64
VARS-224ENST00000479051 FAM71E1Q6IPT2 247 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 SLC29A4Q7RTT9 530 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 CNTRLQ7Z7A1 2325 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 TMEM156Q8N614 296 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 ZNF321PQ8N8H1 164 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 TUBGCP3Q96CW5 907 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 FCRL1Q96LA6 429 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 BRINP2Q9C0B6 783 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 MANSC1Q9H8J5 431 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 ZNF395Q9H8N7 513 aaPredicted RBP19.04■□□□□ 0.64
VARS-224ENST00000479051 SLC35C2Q9NQQ7 365 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 MAP10Q9P2G4 905 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 HAO1Q9UJM8 370 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 PCDHGA10Q9Y5H3 936 aa19.04■□□□□ 0.64
VARS-224ENST00000479051 SMG1Q96Q15 3661 aaKnown RBP19.04■□□□□ 0.64
VARS-224ENST00000479051 A0A1W2PS29 197 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 OR6C76A6NM76 312 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 MAN1A2O60476 641 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 PRAMEF2O60811 474 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 PEX11AO75192 247 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 ITGA10O75578 1167 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 CD46P15529 392 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 DDX5P17844 614 aaKnown RBP19.03■□□□□ 0.64
VARS-224ENST00000479051 CD96P40200 585 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 ASMTP46597 345 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 SSR4P51571 173 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 MAD2L1Q13257 205 aaPredicted RBP19.03■□□□□ 0.64
VARS-224ENST00000479051 OR1C1Q15619 314 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 ZNF750Q32MQ0 723 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms