RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 HCCSP53701 268 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 NTRK3Q16288 839 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 DUSP7Q16829 419 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 OR52E8Q6IFG1 317 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 RNF19BQ6ZMZ0 732 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 MON1AQ86VX9 555 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 CPNE8Q86YQ8 564 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 SUMF2Q8NBJ7 301 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ZNF439Q8NDP4 499 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 FBXO25Q8TCJ0 367 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 TLCD1Q96CP7 247 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ZNF416Q9BWM5 594 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 DYNLRB1Q9NP97 96 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 LAMP3Q9UQV4 416 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 CEP152O94986 1710 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 LOC102723971A0A1B0GUV8 181 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 BTNL10A8MVZ5 291 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 FOXN1O15353 648 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 IRAK2O43187 625 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 B4GALT4O60513 344 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 EDNRAP25101 427 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 HOXD11P31277 338 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 GNPDA1P46926 289 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 SUOXP51687 545 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 KCNJ11Q14654 390 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 SH3PXD2AQ5TCZ1 1133 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 TMPRSS11BQ86T26 416 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 MIB1Q86YT6 1006 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 SPPL2CQ8IUH8 684 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 AGBL3Q8NEM8 1001 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 LPGAT1Q92604 370 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 FAM46BQ96A09 425 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 DZANK1Q9NVP4 752 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 SPHK1Q9NYA1 384 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PCYOX1Q9UHG3 505 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ZFR2Q9UPR6 939 aaKnown RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 AMDHD2Q9Y303 409 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 UGGT1Q9NYU2 1555 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 DDTLA6NHG4 134 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 C21orf2O43822 256 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 TLL1O43897 1013 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 TKTL1P51854 596 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 RAB10P61026 200 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 FKBP1BP68106 108 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 NKX3-2P78367 333 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PCDH1Q08174 1060 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 FAM69AQ5T7M9 428 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 SP8Q8IXZ3 490 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 OR52E4Q8NGH9 312 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 UHRF1Q96T88 793 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 PKP2Q99959 881 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 TMEM117Q9H0C3 514 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 FOLH1BQ9HBA9 442 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 APMAPQ9HDC9 416 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 DECR2Q9NUI1 292 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PDP1Q9P0J1 537 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 SETD1AO15047 1707 aaKnown RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 CDK5RAP2Q96SN8 1893 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 A0A1W2PQ09 198 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PHOX2AO14813 284 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 SERPINA6P08185 405 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 YBX3P16989 372 aaKnown RBP eCLIP5.22□□□□□ -1.57
USF3-202ENST00000478658 MAGEA11P43364 429 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 XKP51811 444 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 YBX1P67809 324 aaKnown RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 ZNF674Q2M3X9 581 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 STYK1Q6J9G0 422 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 TRIM46Q7Z4K8 759 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 FAM58AQ8N1B3 248 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 KCNRGQ8N5I3 272 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 OR5M1Q8NGP8 315 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 OR10Q1Q8NGQ4 319 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 SETD7Q8WTS6 366 aaKnown RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 PCNPQ8WW12 178 aaKnown RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 CNTNAP3BQ96NU0 1288 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 NIPAL2Q9H841 368 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 LRTM1Q9HBL6 345 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 TMEM248Q9NWD8 314 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 POLDIP2Q9Y2S7 368 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 DERAQ9Y315 318 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PTPRTO14522 1441 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ZNF182P17025 639 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 EGR1P18146 543 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 IL32P24001 234 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PRKCHP24723 683 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 HINT1P49773 126 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 MAP2K6P52564 334 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 DLX2Q07687 328 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 FAM171A1Q5VUB5 890 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 OR2W6PQ8NHA6 318 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 SLCO5A1Q9H2Y9 848 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 KCNJ16Q9NPI9 418 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 NLE1Q9NVX2 485 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 CA14Q9ULX7 337 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 KCTD3Q9Y597 815 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PMF1-BGLAPU3KQ54 211 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ATRNL1Q5VV63 1379 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ELOVL7A1L3X0 281 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ZNF705EA8MWA4 302 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 F5H5K5 113 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms