RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 LRRK2Q5S007 2527 aa6.43□□□□□ -1.38
BRCA1-215ENST00000478531 C2orf72A6NCS6 295 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 PRKNO60260 465 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 LRATO95237 230 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 DDAH2O95865 285 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 WDPCPO95876 746 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 FGF4P08620 206 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 KITP10721 976 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 NT5EP21589 574 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 TACR1P25103 407 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 RPL14P50914 215 aaKnown RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 SLC18A1P54219 525 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 TRA2BP62995 288 aaKnown RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ERVK-8P63133 956 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 C19orf57Q0VDD7 668 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF267Q14586 743 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 HEPACAMQ14CZ8 416 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 MEP1AQ16819 746 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ATP6AP1LQ52LC2 224 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 XKR7Q5GH72 579 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ACER2Q5QJU3 275 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ATG16L1Q676U5 607 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 SLC6A19Q695T7 634 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 GALNT18Q6P9A2 607 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 Q6ZSR9 355 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 RIT1Q92963 219 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 TUBGCP3Q96CW5 907 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 C11orf24Q96F05 449 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 TSSK3Q96PN8 268 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 GAL3ST4Q96RP7 486 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 NPAS2Q99743 824 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 TRIM4Q9C037 500 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 CDCP1Q9H5V8 836 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 MANSC1Q9H8J5 431 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 MIEF1Q9NQG6 463 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 PNPOQ9NVS9 261 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 STMN3Q9NZ72 180 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ABI3Q9P2A4 366 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF223Q9UK11 482 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 PSME2Q9UL46 239 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ERVK-19Q9WJR5 959 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF780BQ9Y6R6 833 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 EXPH5Q8NEV8 1989 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 SHANK1Q9Y566 2161 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 NUP214P35658 2090 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 GABRR3A8MPY1 467 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 B8ZZF3 427 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 AKAP10O43572 662 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 SLC28A2O43868 658 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 SLC35E2P0CK97 266 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 CPMP14384 443 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 PORP16435 677 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 SDC1P18827 310 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 PRPH2P23942 346 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 PPP2R2AP63151 447 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 C2orf80Q0P641 193 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 KIAA0040Q15053 153 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 RFTN2Q52LD8 501 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 HSDL2Q6YN16 418 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 C16orf47Q6ZP98 133 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 RNF165Q6ZSG1 346 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 RPS19BP1Q86WX3 136 aaKnown RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 TRIM42Q8IWZ5 723 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 GALNT12Q8IXK2 581 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 LRRC25Q8N386 305 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 LIX1Q8N485 282 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 FNDC5Q8NAU1 212 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 MORN4Q8NDC4 146 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 CATSPER1Q8NEC5 780 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ADCY4Q8NFM4 1077 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 OR1N1Q8NGS0 311 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 FAM76AQ8TAV0 307 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF721Q8TF20 911 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 SENP5Q96HI0 755 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 EGLN2Q96KS0 407 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ART5Q96L15 291 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF354BQ96LW1 612 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 PPP3R2Q96LZ3 170 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 PELOQ9BRX2 385 aaKnown RBP6.42□□□□□ -1.38
BRCA1-215ENST00000478531 NUF2Q9BZD4 464 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 BRINP2Q9C0B6 783 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 EPN3Q9H201 632 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 MYNNQ9NPC7 610 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 SLAMF7Q9NQ25 335 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 GIMAP4Q9NUV9 329 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 THAP1Q9NVV9 213 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 BAIAP2L1Q9UHR4 511 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ANAPC2Q9UJX6 822 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 CES1P1Q9UKY3 287 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 ENTPD4Q9Y227 616 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 B3GNT3Q9Y2A9 372 aa6.42□□□□□ -1.38
BRCA1-215ENST00000478531 TTLL8A6PVC2 850 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 PYCARD-AS1I3L0S3 204 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 WWP2O00308 870 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 FCHO1O14526 889 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 OR2J2O76002 312 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 SNUPNO95149 360 aaKnown RBP6.41□□□□□ -1.38
BRCA1-215ENST00000478531 CT62P0C5K7 136 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 DRD2P14416 443 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms