RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ATP5A1P25705 553 aaKnown RBP18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 SOX18P35713 384 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 GDF5P43026 501 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 SLCO1A2P46721 670 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 ZNF75DP51815 510 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 EBPQ15125 230 aaKnown RBP18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 C18orf21Q32NC0 220 aaPredicted RBP18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 BICRALQ6AI39 1079 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 C20orf204Q6ZNR8 217 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 UBE3DQ7Z6J8 389 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 ACOT4Q8N9L9 421 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 ABTB1Q969K4 478 aaPredicted RBP18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 TBCDQ9BTW9 1192 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 PIGMQ9H3S5 423 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 GPRC5BQ9NZH0 403 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 GUCA1BQ9UMX6 200 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 VWA7Q9Y334 891 aa18.48■□□□□ 0.55
PDLIM1-202ENST00000477757 RAI1Q7Z5J4 1906 aaPredicted RBP18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 TP53I11O14683 189 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 TTC4O95801 387 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 CYP4B1P13584 511 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 PTMSP20962 102 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 EIPR1Q53HC9 387 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 TTC27Q6P3X3 843 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 OR4N5Q8IXE1 308 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 PHC2Q8IXK0 858 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 NAT8LQ8N9F0 302 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 BBOF1Q8ND07 529 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 SRFBP1Q8NEF9 429 aaKnown RBP18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 PPWD1Q96BP3 646 aaKnown RBP18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 GNRHR2Q96P88 292 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 SECISBP2Q96T21 854 aaKnown RBP18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 TM9SF2Q99805 663 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 CAPS2Q9BXY5 557 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 ANGPTL4Q9BY76 406 aa18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 ZNF490Q9ULM2 529 aaPredicted RBP18.47■□□□□ 0.55
PDLIM1-202ENST00000477757 PRAMEF4O60810 478 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 RCBTB2O95199 551 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 C8BP07358 591 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 HIST1H1TP22492 207 aaPredicted RBP18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 CPN2P22792 545 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 MASP1P48740 699 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 PTH2RP49190 550 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 NAGLUP54802 743 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 SLC37A1P57057 533 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 HERVK_113P63132 956 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 ERVK-8P63133 956 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 KRTAP1-1Q07627 177 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 SPRED3Q2MJR0 410 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 WIPI1Q5MNZ9 446 aaPredicted RBP18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 PRAMEF9Q5VWM5 478 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 RNF111Q6ZNA4 994 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 ADGRE4PQ86SQ3 457 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 PACS2Q86VP3 889 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 TAGAPQ8N103 731 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 ZNF441Q8N8Z8 693 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 SPPL2AQ8TCT8 520 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 SLC44A1Q8WWI5 657 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 RHBDF1Q96CC6 855 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 CERS2Q96G23 380 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 RBM18Q96H35 190 aaKnown RBP18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 TUBA1CQ9BQE3 449 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 ERVK-6Q9BXR3 956 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 ACBD3Q9H3P7 528 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 FETUBQ9UGM5 382 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 PACSIN3Q9UKS6 424 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 ERVK-19Q9WJR5 959 aa18.46■□□□□ 0.55
PDLIM1-202ENST00000477757 CUBNO60494 3623 aa18.46■□□□□ 0.54
PDLIM1-202ENST00000477757 IQANK1A0A1B0GTG1 560 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 OR6C76A6NM76 312 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 CAPN14A8MX76 684 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 A8MXE2 369 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 RTCAO00442 366 aaKnown RBP18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 ACTL6AO96019 429 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 CPN1P15169 458 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 CPOXP36551 454 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 DIO3P55073 304 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 FBXW4P57775 412 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 BIKQ13323 160 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 TOMM20Q15388 145 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 SPANXN3Q5MJ09 141 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 FRA10AC1Q70Z53 315 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 ADAMTSL2Q86TH1 951 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 NKAPQ8N5F7 415 aaKnown RBP18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 INTS12Q96CB8 462 aaKnown RBP18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 WDR34Q96EX3 536 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 PIK3IP1Q96FE7 263 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 UCN2Q96RP3 112 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 MS4A8Q9BY19 250 aa18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 TEX10Q9NXF1 929 aaPredicted RBP18.45■□□□□ 0.54
PDLIM1-202ENST00000477757 ANK2Q01484 3957 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 CLPSP04118 112 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 ALOX15P16050 662 aaPredicted RBP18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 CD22P20273 847 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 CRYGSP22914 178 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 MC3RP41968 323 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 PCYT1AP49585 367 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 TSNQ15631 228 aaKnown RBP18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 TEDDM1Q5T9Z0 273 aa18.44■□□□□ 0.54
PDLIM1-202ENST00000477757 TMEM64Q6YI46 380 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms