RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 PTPN13Q12923 2485 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 EML6Q6ZMW3 1958 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 C17orf105B2RV13 164 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 SLCO1B7G3V0H7 640 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 MANBAO00462 879 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 AZIN1O14977 448 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 NR0B1P51843 470 aaKnown RBP16.41■□□□□ 0.22
PTPN7-209ENST00000477554 TDGF1P3P51864 188 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 KCNK10P57789 538 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 ELAVL1Q15717 326 aaKnown RBP16.41■□□□□ 0.22
PTPN7-209ENST00000477554 WDR75Q8IWA0 830 aaKnown RBP16.41■□□□□ 0.22
PTPN7-209ENST00000477554 LRRC34Q8IZ02 419 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 SLC2A12Q8TD20 617 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 ZNF721Q8TF20 911 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 SELENOMQ8WWX9 145 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 SLX1AQ9BQ83 275 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 UTP23Q9BRU9 249 aaKnown RBP16.41■□□□□ 0.22
PTPN7-209ENST00000477554 TSPAN10Q9H1Z9 355 aaPredicted RBP16.41■□□□□ 0.22
PTPN7-209ENST00000477554 ELOVL6Q9H5J4 265 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 TEKT2Q9UIF3 430 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 TRAF6Q9Y4K3 522 aa16.41■□□□□ 0.22
PTPN7-209ENST00000477554 ANKUB1A6NFN9 424 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 TGDSO95455 350 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 CHEK2O96017 543 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 CLPSP04118 112 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 UROSP10746 265 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 CLCN2P51788 898 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 OC90Q02509 493 aaPredicted RBP16.4■□□□□ 0.22
PTPN7-209ENST00000477554 DUSP2Q05923 314 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 IFT88Q13099 833 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 RNFT1Q5M7Z0 435 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 HIST2H2BCQ6DN03 193 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 RPUSD3Q6P087 351 aaKnown RBP16.4■□□□□ 0.22
PTPN7-209ENST00000477554 COMMD6Q7Z4G1 85 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 MDGA2Q7Z553 956 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 NUDT13Q86X67 352 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 METTL4Q8N3J2 472 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 METTL6Q8TCB7 284 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 VMP1Q96GC9 406 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 SCMH1Q96GD3 660 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 SERPINI1Q99574 410 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 SLC29A3Q9BZD2 475 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 ACPTQ9BZG2 426 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 FGFR1OP2Q9NVK5 253 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 PSD3Q9NYI0 1048 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 PPT2Q9UMR5 302 aa16.4■□□□□ 0.22
PTPN7-209ENST00000477554 WWP2O00308 870 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 ITGA10O75578 1167 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 OR2J2O76002 312 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 TROVE2P10155 538 aaKnown RBP eCLIP16.39■□□□□ 0.21
PTPN7-209ENST00000477554 NR2F6P10588 404 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 SERPINB3P29508 390 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 HMOX2P30519 316 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 RFC3P40938 356 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 SEC24CP53992 1094 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 TAS2R50P59544 299 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 AP2B1P63010 937 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 RAE1P78406 368 aaKnown RBP16.39■□□□□ 0.21
PTPN7-209ENST00000477554 PHEXP78562 749 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 HMGCS1Q01581 520 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 TERF2Q15554 542 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 KANK2Q63ZY3 851 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 CYP20A1Q6UW02 462 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 GALNTL5Q7Z4T8 443 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 CPLX4Q7Z7G2 160 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 ARMC10Q8N2F6 343 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 FAM26EQ8N5C1 309 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 C1orf52Q8N6N3 182 aaKnown RBP16.39■□□□□ 0.21
PTPN7-209ENST00000477554 AGR3Q8TD06 166 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 PFDN4Q9NQP4 134 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 OLAHQ9NV23 265 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 PNPOQ9NVS9 261 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 LRFN1Q9P244 771 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 ERRFI1Q9UJM3 462 aaPredicted RBP16.39■□□□□ 0.21
PTPN7-209ENST00000477554 SNX6Q9UNH7 406 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 PTGDR2Q9Y5Y4 395 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 CLCA3PQ9Y6N3 262 aa16.39■□□□□ 0.21
PTPN7-209ENST00000477554 A0A0G2JMM0 328 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 A0A1W2PPB8 328 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 A0A1W2PRS3 328 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 KIR3DP1A8MWS1 328 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 SEMA3DO95025 777 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 KRT6AP02538 564 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 KRT6BP04259 564 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 CT62P0C5K7 136 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 KITP10721 976 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 TNNI3P19429 210 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 STT3AP46977 705 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 KRT6CP48668 564 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 C10orf62Q5T681 223 aaPredicted RBP16.38■□□□□ 0.21
PTPN7-209ENST00000477554 FAM180AQ6UWF9 173 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 C9orf40Q8IXQ3 194 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 SIMC1Q8NDZ2 872 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 APIPQ96GX9 242 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 SIKE1Q9BRV8 207 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 CENPKQ9BS16 269 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 PHF11Q9UIL8 331 aa16.38■□□□□ 0.21
PTPN7-209ENST00000477554 BLACEA4D250 179 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 SLC25A12O75746 678 aa16.37■□□□□ 0.21
PTPN7-209ENST00000477554 OR6B1O95007 311 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms