RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	ZDHHC11B	P0C7U3	371 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC2A1	P11166	492 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC2A2	P11168	524 aa	Predicted RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	FOLR2	P14207	255 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	MAG	P20916	626 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	GPD1	P21695	349 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	GAL	P22466	123 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	HRH2	P25021	359 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	DDX6	P26196	483 aa	Known RBP eCLIP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ALDH4A1	P30038	563 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	HOXC13	P31276	330 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	RPL35	P42766	123 aa	Known RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	MAP2K4	P45985	399 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	CAPZA2	P47755	286 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	FNTB	P49356	437 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SPCS3	P61009	180 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	UBE2I	P63279	158 aa	Known RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ABAT	P80404	500 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ALDH6A1	Q02252	535 aa	Known RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF33A	Q06730	810 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	IFRD2	Q12894	506 aa	Predicted RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	RPA4	Q13156	261 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	MTMR1	Q13613	665 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ERV3-1	Q14264	604 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	CAPRIN1	Q14444	709 aa	Known RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	FGFBP1	Q14512	234 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	TSN	Q15631	228 aa	Known RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SMAD2	Q15796	467 aa	Known RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF79	Q15937	498 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ETFDH	Q16134	617 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	IQCC	Q4KMZ1	466 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ATP13A5	Q4VNC0	1218 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	KLHL22	Q53GT1	634 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	NOMO2	Q5JPE7	1267 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	C10orf62	Q5T681	223 aa	Predicted RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	GPRC6A	Q5T6X5	926 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ATG9B	Q674R7	924 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC25A25	Q6KCM7	469 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	KIAA1211L	Q6NV74	962 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SPESP1	Q6UW49	350 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	KDELC1	Q6UW63	502 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	FAM198B	Q6UWH4	519 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	LAYN	Q6UX15	382 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	BTN2A1	Q7KYR7	527 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	GPR149	Q86SP6	731 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	KCNMB4	Q86W47	210 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	TMC8	Q8IU68	726 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	CBWD2	Q8IUF1	395 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	C1orf210	Q8IVY1	113 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	TRIM48	Q8IWZ4	208 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	PDZD9	Q8IXQ8	264 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	C4orf19	Q8IY42	314 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC22A15	Q8IZD6	547 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	DAW1	Q8N136	415 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SVBP	Q8N300	66 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	DNAJC22	Q8N4W6	341 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ARFGAP1	Q8N6T3	406 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	RCBTB1	Q8NDN9	531 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	TMEM161B	Q8NDZ6	487 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	DMBX1	Q8NFW5	382 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	FBXO30	Q8TB52	745 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	TMEM163	Q8TC26	289 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SFT2D1	Q8WV19	159 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	HEXDC	Q8WVB3	486 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	HTR3C	Q8WXA8	447 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ASB12	Q8WXK4	309 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	GTF3A	Q92664	365 aa	Known RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	CENPI	Q92674	756 aa	Predicted RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	DIO2	Q92813	273 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	KAT2A	Q92830	837 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC25A36	Q96CQ1	311 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZG16B	Q96DA0	208 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SIPA1	Q96FS4	1042 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	MRPL48	Q96GC5	212 aa	Known RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	MRGPRX3	Q96LB0	322 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	COQ10A	Q96MF6	247 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC38A2	Q96QD8	506 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	RBP7	Q96R05	134 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ACOX2	Q99424	681 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SOST	Q9BQB4	213 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	MXRA8	Q9BRK3	442 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	H2AFJ	Q9BTM1	129 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	GABARAPL3	Q9BY60	117 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC25A32	Q9H2D1	315 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	MIXL1	Q9H2W2	232 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	POMK	Q9H5K3	350 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	DHX35	Q9H5Z1	703 aa	Known RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	TCF7L1	Q9HCS4	588 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC52A3	Q9NQ40	469 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	CASS4	Q9NQ75	786 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ACSS2	Q9NR19	701 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	PDGFC	Q9NRA1	345 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	GSN-AS1	Q9NRJ2	163 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	DCAF13	Q9NV06	445 aa	Known RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	AIG1	Q9NVV5	245 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	C14orf119	Q9NWQ9	140 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	IMPAD1	Q9NX62	359 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	CD274	Q9NZQ7	290 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	STOX2	Q9P2F5	926 aa	Predicted RBP	4.48	□□□□□ -1.69

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