RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 LPAR4Q99677 370 aa14.81□□□□□ -0.04
COPS3-207ENST00000477299 TUBB6Q9BUF5 446 aa14.81□□□□□ -0.04
COPS3-207ENST00000477299 NUDT9Q9BW91 350 aa14.81□□□□□ -0.04
COPS3-207ENST00000477299 RABEP2Q9H5N1 569 aa14.81□□□□□ -0.04
COPS3-207ENST00000477299 LIN28AQ9H9Z2 209 aaKnown RBP14.81□□□□□ -0.04
COPS3-207ENST00000477299 ZBTB20Q9HC78 741 aaPredicted RBP14.81□□□□□ -0.04
COPS3-207ENST00000477299 ATP13A2Q9NQ11 1180 aa14.81□□□□□ -0.04
COPS3-207ENST00000477299 TCF7L2Q9NQB0 619 aa14.81□□□□□ -0.04
COPS3-207ENST00000477299 SLC35C2Q9NQQ7 365 aa14.81□□□□□ -0.04
COPS3-207ENST00000477299 AIG1Q9NVV5 245 aa14.81□□□□□ -0.04
COPS3-207ENST00000477299 NOP53Q9NZM5 478 aaKnown RBP14.81□□□□□ -0.04
COPS3-207ENST00000477299 SH3BP4Q9P0V3 963 aa14.81□□□□□ -0.04
COPS3-207ENST00000477299 CNTRLQ7Z7A1 2325 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 A0A0G2JND7 137 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 MYO1GB0I1T2 1018 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 SCAMP2O15127 329 aaKnown RBP14.8□□□□□ -0.04
COPS3-207ENST00000477299 TGDSO95455 350 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 CLPSP04118 112 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 S1PR1P21453 382 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 ITGA3P26006 1051 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 SSTR4P31391 388 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 CLDN8P56748 225 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 PHC1P78364 1004 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 MRPS35P82673 323 aaKnown RBP14.8□□□□□ -0.04
COPS3-207ENST00000477299 SERTAD2Q14140 314 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 B3GNTL1Q67FW5 361 aaPredicted RBP14.8□□□□□ -0.04
COPS3-207ENST00000477299 FCRLBQ6BAA4 426 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 BORAQ6PGQ7 559 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 C16orf47Q6ZP98 133 aaPredicted RBP14.8□□□□□ -0.04
COPS3-207ENST00000477299 IKBIPQ70UQ0 350 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 SPATA19Q7Z5L4 167 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 APLFQ8IW19 511 aaPredicted RBP14.8□□□□□ -0.04
COPS3-207ENST00000477299 ST13P4Q8IZP2 240 aaPredicted RBP14.8□□□□□ -0.04
COPS3-207ENST00000477299 GALNT16Q8N428 558 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 SIRT6Q8N6T7 355 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 EXD3Q8N9H8 876 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 APCDD1LQ8NCL9 501 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 FDCSPQ8NFU4 85 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 CEP70Q8NHQ1 597 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 BRIX1Q8TDN6 353 aaKnown RBP14.8□□□□□ -0.04
COPS3-207ENST00000477299 ZNF721Q8TF20 911 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 APOBEC4Q8WW27 367 aaKnown RBP14.8□□□□□ -0.04
COPS3-207ENST00000477299 KAT2AQ92830 837 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 FER1L6-AS2Q96M78 137 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 NPAS2Q99743 824 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 TMEM120AQ9BXJ8 343 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 OR8D2Q9GZM6 311 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 GLIPR2Q9H4G4 154 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 CXorf21Q9HAI6 301 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 MIEF1Q9NQG6 463 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 TAS2R7Q9NYW3 318 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 ATP6V1HQ9UI12 483 aa14.8□□□□□ -0.04
COPS3-207ENST00000477299 UBDO15205 165 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 OR10H2O60403 315 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 PDGFAP04085 211 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 FAM87AP0C7U9 286 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 CSNK2A2P19784 350 aaPredicted RBP14.79□□□□□ -0.04
COPS3-207ENST00000477299 NT5EP21589 574 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 LSP1P33241 339 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 GSTM5P46439 218 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 ASMTP46597 345 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 ZFP36L2P47974 494 aaKnown RBP14.79□□□□□ -0.04
COPS3-207ENST00000477299 POLE2P56282 527 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 GNGT1P63211 74 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 DUSP8Q13202 625 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 MAD2L1Q13257 205 aaPredicted RBP14.79□□□□□ -0.04
COPS3-207ENST00000477299 EXOSC7Q15024 291 aaKnown RBP14.79□□□□□ -0.04
COPS3-207ENST00000477299 CEBPEQ15744 281 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 PRICKLE4Q2TBC4 344 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 TRMT12Q53H54 448 aaKnown RBP14.79□□□□□ -0.04
COPS3-207ENST00000477299 PLAG1Q6DJT9 500 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 ZNF551Q7Z340 670 aaPredicted RBP14.79□□□□□ -0.04
COPS3-207ENST00000477299 B3GNT7Q8NFL0 401 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 OR9I1Q8NGQ6 314 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 OR9A2Q8NGT5 310 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 SLC2A12Q8TD20 617 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 ELP5Q8TE02 316 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 THAP3Q8WTV1 239 aaPredicted RBP14.79□□□□□ -0.04
COPS3-207ENST00000477299 RIT1Q92963 219 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 PPCDCQ96CD2 204 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 SENP5Q96HI0 755 aaPredicted RBP14.79□□□□□ -0.04
COPS3-207ENST00000477299 CNPPD1Q9BV87 410 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 MAT2BQ9NZL9 334 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 EHD3Q9NZN3 535 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 PSME2Q9UL46 239 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 ERVK-11Q9UQG0 969 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 ERVK-19Q9WJR5 959 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 WBP11Q9Y2W2 641 aaKnown RBP14.79□□□□□ -0.04
COPS3-207ENST00000477299 CLCA3PQ9Y6N3 262 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 ZNF780BQ9Y6R6 833 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 NBEAQ8NFP9 2946 aa14.79□□□□□ -0.04
COPS3-207ENST00000477299 ATMQ13315 3056 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 TMEM200CA6NKL6 621 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 A8MUI8 341 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 PCDH17O14917 1159 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 TBX19O60806 448 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 CEACAM4O75871 244 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 SERPINA7P05543 415 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 COX7A2P14406 83 aa14.78□□□□□ -0.04
COPS3-207ENST00000477299 PCSK2P16519 638 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms