RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 LIPKQ5VXJ0 399 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 GPR62Q9BZJ7 368 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 MVB12BQ9H7P6 319 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 UNCXA6NJT0 531 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 P04436 131 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 CELP19835 753 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 AK4P27144 223 aaPredicted RBP17.79■□□□□ 0.44
VARS2-209ENST00000477288 PEBP4Q96S96 227 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 RGCCQ9H4X1 137 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 KCNK13Q9HB14 408 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 RBBP9O75884 186 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 CTHP32929 405 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 ZNF783Q6ZMS7 281 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 CEACAM19Q7Z692 300 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 TMIEQ8NEW7 156 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 DNTTIP1Q9H147 329 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 HSD3B7Q9H2F3 369 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 LIN28AQ9H9Z2 209 aaKnown RBP17.79■□□□□ 0.44
VARS2-209ENST00000477288 TAS2R3Q9NYW6 316 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 ADAM18Q9Y3Q7 739 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 ZNF175Q9Y473 711 aa17.79■□□□□ 0.44
VARS2-209ENST00000477288 PIRO00625 290 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 JUPP14923 745 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 PLEKHN1Q494U1 663 aaPredicted RBP17.78■□□□□ 0.44
VARS2-209ENST00000477288 C6orf183Q5T699 404 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 GPR157Q5UAW9 335 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 ERMP1Q7Z2K6 904 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 PSD4Q8NDX1 1056 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 THRSPQ92748 146 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 AURKBQ96GD4 344 aaPredicted RBP17.78■□□□□ 0.44
VARS2-209ENST00000477288 C1orf74Q96LT6 269 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 GLDCP23378 1020 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 FRKP42685 505 aaPredicted RBP17.78■□□□□ 0.44
VARS2-209ENST00000477288 CATSPEREQ5SY80 951 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 TMPRSS12Q86WS5 348 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 DPH7Q9BTV6 452 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 TEX264Q9Y6I9 313 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 HRH2P25021 359 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 ZNF675Q8TD23 568 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 SPRYD4Q8WW59 207 aaPredicted RBP17.78■□□□□ 0.44
VARS2-209ENST00000477288 SLC39A1Q9NY26 324 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 ATPIF1Q9UII2 106 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 CLIC3O95833 236 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 RNH1P13489 461 aaKnown RBP17.78■□□□□ 0.44
VARS2-209ENST00000477288 LRRC25Q8N386 305 aaPredicted RBP17.78■□□□□ 0.44
VARS2-209ENST00000477288 GPR137CQ8N3F9 429 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 SYT4Q9H2B2 425 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 EMC8O43402 210 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 CRISP1P54107 249 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 GBX1Q14549 363 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 MFSD13AQ14CX5 517 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 KRTCAP2Q8N6L1 136 aa17.78■□□□□ 0.44
VARS2-209ENST00000477288 SH3PXD2BA1X283 911 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 GGT3PA6NGU5 568 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 RPS15AP62244 130 aaKnown RBP17.77■□□□□ 0.44
VARS2-209ENST00000477288 TBPL1P62380 186 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 DHCR24Q15392 516 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 HMBOX1Q6NT76 420 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 NEIL3Q8TAT5 605 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 PEX13Q92968 403 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 MRPL15Q9P015 296 aaKnown RBP17.77■□□□□ 0.44
VARS2-209ENST00000477288 F5H0A9 414 aaPredicted RBP17.77■□□□□ 0.44
VARS2-209ENST00000477288 DFNA5O60443 496 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 RFPL2O75678 378 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 ACVR1BP36896 505 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 MAP2K4P45985 399 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 UBE2NP61088 152 aaKnown RBP17.77■□□□□ 0.44
VARS2-209ENST00000477288 ZNF33AQ06730 810 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 FAM205BPQ63HN1 556 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 PQLC3Q8N755 202 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 RCBTB1Q8NDN9 531 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 OR2T33Q8NG76 320 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 COPZ2Q9P299 210 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 SIX4Q9UIU6 781 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 OARD1Q9Y530 152 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 MAB21L2Q9Y586 359 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 PIAS3Q9Y6X2 628 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 CD8B2A6NJW9 211 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 ACOT7O00154 380 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 CD8BP10966 210 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 ZNF14P17017 642 aaPredicted RBP17.77■□□□□ 0.44
VARS2-209ENST00000477288 PGCP20142 388 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 PLGLAQ15195 96 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 ZNF852Q6ZMS4 543 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 CREB3L1Q96BA8 519 aa17.77■□□□□ 0.44
VARS2-209ENST00000477288 RANBP3Q9H6Z4 567 aaPredicted RBP17.77■□□□□ 0.44
VARS2-209ENST00000477288 BEST1O76090 585 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 MPC1LP0DKB6 136 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 LEPRP48357 1165 aaKnown RBP17.77■□□□□ 0.43
VARS2-209ENST00000477288 LSSP48449 732 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 EXOC3L2Q2M3D2 409 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 OR5L2Q8NGL0 311 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 CNIH3Q8TBE1 160 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 SNED1Q8TER0 1413 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 DIO2Q92813 273 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 IGSF8Q969P0 613 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 PITX2Q99697 317 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 URM1Q9BTM9 101 aaKnown RBP17.77■□□□□ 0.43
VARS2-209ENST00000477288 RNF38Q9H0F5 515 aa17.77■□□□□ 0.43
VARS2-209ENST00000477288 POPDC3Q9HBV1 291 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms