RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 HS3ST4Q9Y661 456 aa10.07□□□□□ -0.8
ABCF1-205ENST00000475993 KRBOX1C9JBD0 128 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 LZTS3O60299 673 aaPredicted RBP10.06□□□□□ -0.8
ABCF1-205ENST00000475993 SCN2BO60939 215 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 S100A9P06702 114 aaKnown RBP10.06□□□□□ -0.8
ABCF1-205ENST00000475993 KLK3P07288 261 aaPredicted RBP10.06□□□□□ -0.8
ABCF1-205ENST00000475993 NUDT7P0C024 238 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 EBLN1P0CF75 366 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 KCNE1P15382 129 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 SMPD1P17405 629 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 CXCL3P19876 107 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 LIMS1P48059 325 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 HNMTP50135 292 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 ATP12AP54707 1039 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 ERVK-25P63136 954 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 ZNF57Q68EA5 555 aaPredicted RBP10.06□□□□□ -0.8
ABCF1-205ENST00000475993 TMIGD1Q6UXZ0 262 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 ZNF621Q6ZSS3 439 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 SYT14Q8NB59 555 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 OR4K2Q8NGD2 314 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 OR2T4Q8NH00 348 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 PIH1D2Q8WWB5 315 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 GTPBP3Q969Y2 492 aaKnown RBP10.06□□□□□ -0.8
ABCF1-205ENST00000475993 RAB7BQ96AH8 199 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 EXOSC8Q96B26 276 aaKnown RBP10.06□□□□□ -0.8
ABCF1-205ENST00000475993 SLC6A18Q96N87 628 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 IL4I1Q96RQ9 567 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 WDR77Q9BQA1 342 aaPredicted RBP10.06□□□□□ -0.8
ABCF1-205ENST00000475993 MED9Q9NWA0 146 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 ASB4Q9Y574 426 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 PTCH2Q9Y6C5 1203 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 LOC730098B7Z3J9 87 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 LRATO95237 230 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 DHFRP00374 187 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 C1SP09871 688 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 BPIP17213 487 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 TNFRSF1BP20333 461 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 PSMA3P25788 255 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 AQP1P29972 269 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 IRS1P35568 1242 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 GDF5P43026 501 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 BDKRB1P46663 353 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 CAV3P56539 151 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 WNT3P56703 355 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 SPDYE7PQ495Y7 208 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 PLK5Q496M5 336 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 XKR4Q5GH76 650 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 C3orf38Q5JPI3 329 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 PSAPL1Q6NUJ1 521 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 IL17RCQ8NAC3 791 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 OR5T2Q8NGG2 359 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 OR8D4Q8NGM9 314 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 CA5BP1Q8WTZ4 195 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 TM9SF4Q92544 642 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 SLC29A3Q9BZD2 475 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 CSNK1G1Q9HCP0 422 aa10.06□□□□□ -0.8
ABCF1-205ENST00000475993 SARS2Q9NP81 518 aaKnown RBP10.06□□□□□ -0.8
ABCF1-205ENST00000475993 TCRBV16S1A1N1A0A5B0 115 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 PRAMEF25A6NGN4 478 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 DBX1A6NMT0 343 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 A8MXK9 166 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 STK25O00506 426 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 SIGLEC5O15389 551 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 PRMT3O60678 531 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 CXCL14O95715 111 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 HRGP04196 525 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 CTPS1P17812 591 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 IGFBP6P24592 240 aaPredicted RBP10.05□□□□□ -0.8
ABCF1-205ENST00000475993 MAPK1P28482 360 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 PCGF2P35227 344 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 TTPAP49638 278 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 RPL6Q02878 288 aaKnown RBP10.05□□□□□ -0.8
ABCF1-205ENST00000475993 SIGLEC14Q08ET2 396 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 NHLRC3Q5JS37 347 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 OR7E24Q6IFN5 339 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 C12orf40Q86WS4 652 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 GPR65Q8IYL9 337 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 OR4A15Q8NGL6 344 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 ASZ1Q8WWH4 475 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 NSMAFQ92636 917 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 SMARCD1Q96GM5 515 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 SENP5Q96HI0 755 aaPredicted RBP10.05□□□□□ -0.8
ABCF1-205ENST00000475993 TRIB3Q96RU7 358 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 ATF6BQ99941 703 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 RBCK1Q9BYM8 510 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 NDOR1Q9UHB4 597 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 EXO1Q9UQ84 846 aaKnown RBP10.05□□□□□ -0.8
ABCF1-205ENST00000475993 YARS2Q9Y2Z4 477 aaKnown RBP10.05□□□□□ -0.8
ABCF1-205ENST00000475993 SF3B6Q9Y3B4 125 aaKnown RBP10.05□□□□□ -0.8
ABCF1-205ENST00000475993 DSPPQ9NZW4 1301 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 GLYATL1P3A0A0U1RQE8 302 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 A0A1B0GVI7 797 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 ARGFXA6NJG6 315 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 WRBO00258 174 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 TREHO43280 583 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 GUCA1CO95843 209 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 LALBAP00709 142 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 RLN2P04090 185 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 BTCP35070 178 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 HMGA2P52926 109 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms