RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 IMPA1P29218 277 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 SERPINB1P30740 379 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 GJA4P35212 333 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 RPL3P39023 403 aaKnown RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 RFX2P48378 723 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 PRIM2P49643 509 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 CRISP1P54107 249 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 CRISP3P54108 245 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 COPZ1P61923 177 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 LSM3P62310 102 aaKnown RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 ST3GAL4Q11206 333 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 PTGES3Q15185 160 aaKnown RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 SF3B4Q15427 424 aaKnown RBP eCLIP6.52□□□□□ -1.371e-6■□□□□ 8.6
UBR4-212ENST00000475973 RSPO4Q2I0M5 234 aaPredicted RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 PRSS53Q2L4Q9 553 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 MPPE1Q53F39 396 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 SGO1Q5FBB7 561 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 COLEC12Q5KU26 742 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 HENMT1Q5T8I9 393 aaKnown RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 CPTPQ5TA50 214 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 PLAG1Q6DJT9 500 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 CD200R1LQ6Q8B3 271 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 CCBE1Q6UXH8 406 aaPredicted RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 Q6ZPB1 254 aaPredicted RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 ZNF621Q6ZSS3 439 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 IKBIPQ70UQ0 350 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 ARMCX6Q7L4S7 300 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 AKAP14Q86UN6 197 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 THOC6Q86W42 341 aaKnown RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 P3H2Q8IVL5 708 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 RDH10Q8IZV5 341 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 CAMKK1Q8N5S9 505 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 TRAM1L1Q8N609 369 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 NATD1Q8N6N6 113 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 ZNF485Q8NCK3 441 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 PROKR2Q8NFJ6 384 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 B3GNT7Q8NFL0 401 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 BTN2A2Q8WVV5 523 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 GEMIN6Q8WXD5 167 aaKnown RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 ASB15Q8WXK1 588 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 KIAA1143Q96AT1 154 aaPredicted RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 SH3KBP1Q96B97 665 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 MTFMTQ96DP5 389 aaKnown RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 SLC6A18Q96N87 628 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 KCNC2Q96PR1 638 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 MGLLQ99685 303 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 PIP5K1AQ99755 562 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 DPH2Q9BQC3 489 aaPredicted RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 CCM2Q9BSQ5 444 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 MED18Q9BUE0 208 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 BARHL1Q9BZE3 327 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 OR2B2Q9GZK3 357 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 SRRQ9GZT4 340 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 RASSF1Q9NS23 344 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 DLL3Q9NYJ7 618 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 STOX2Q9P2F5 926 aaPredicted RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 TESQ9UGI8 421 aaKnown RBP6.52□□□□□ -1.37
UBR4-212ENST00000475973 CLEC4EQ9ULY5 219 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 VPS4AQ9UN37 437 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 USP34Q70CQ2 3546 aa6.52□□□□□ -1.37
UBR4-212ENST00000475973 ANKRD12Q6UB98 2062 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 DOCK8Q8NF50 2099 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 PIKFYVEQ9Y2I7 2098 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 ZFHX2Q9C0A1 2572 aaPredicted RBP6.51□□□□□ -1.37
UBR4-212ENST00000475973 PRAMEF33A0A0G2JMD5 474 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 HMX3A6NHT5 357 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 E7EQ34 232 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 ZNF670-ZNF695F2Z2N8 137 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 LEFTY2O00292 366 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 ZW10O43264 779 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 EFSO43281 561 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 TBX1O43435 398 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 PRAMEF10O60809 474 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 APBB3O95704 486 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 POP4O95707 220 aaKnown RBP6.51□□□□□ -1.37
UBR4-212ENST00000475973 TBX6O95947 436 aaPredicted RBP6.51□□□□□ -1.37
UBR4-212ENST00000475973 EGFP01133 1207 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 ALPPP05187 535 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 THBS1P07996 1170 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 HIST1H2AGP0C0S8 130 aaPredicted RBP6.51□□□□□ -1.37
UBR4-212ENST00000475973 ERGP11308 486 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 COX7A2P14406 83 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 HIST1H2ADP20671 130 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 PTBP1P26599 531 aaKnown RBP eCLIP6.51□□□□□ -1.37
UBR4-212ENST00000475973 HLA-FP30511 346 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 TNFSF8P32971 234 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 OPRD1P41143 372 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 PRLHRP49683 370 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 CLK1P49759 484 aaKnown RBP6.51□□□□□ -1.37
UBR4-212ENST00000475973 SNRPD1P62314 119 aaKnown RBP6.51□□□□□ -1.37
UBR4-212ENST00000475973 HBA1P69905 142 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 IRF8Q02556 426 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 ACSM2AQ08AH3 577 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 SPEM2Q0P670 501 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 MLLT11Q13015 90 aaPredicted RBP6.51□□□□□ -1.37
UBR4-212ENST00000475973 ASAH1Q13510 395 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 DGCR6Q14129 220 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 STARD3Q14849 445 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 MLC1Q15049 377 aa6.51□□□□□ -1.37
UBR4-212ENST00000475973 SEC23BQ15437 767 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms