RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, human

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-211	ENST00000475728	GALNT12	Q8IXK2	581 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	GPALPP1	Q8IXQ4	340 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	DDIAS	Q8IXT1	998 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	CISD2	Q8N5K1	135 aa	Known RBP	13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	TMEM178A	Q8NBL3	297 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	GALNT11	Q8NCW6	608 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	OR6Y1	Q8NGX8	325 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	C16orf78	Q8WTQ4	265 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	TMEM125	Q96AQ2	219 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	PPWD1	Q96BP3	646 aa	Known RBP	13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	KLHL29	Q96CT2	875 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	C11orf24	Q96F05	449 aa	Predicted RBP	13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	NPAS2	Q99743	824 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	CNPPD1	Q9BV87	410 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	CXorf21	Q9HAI6	301 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	LRTM1	Q9HBL6	345 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	TNFRSF12A	Q9NP84	129 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	C1orf109	Q9NX04	203 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	NKIRAS1	Q9NYS0	192 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	CES1P1	Q9UKY3	287 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	VPS4A	Q9UN37	437 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	TMED5	Q9Y3A6	229 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	FIS1	Q9Y3D6	152 aa		13.44	□□□□□ -0.26
ABCF3-211	ENST00000475728	PRRC2C	Q9Y520	2896 aa	Known RBP	13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	BSN	Q9UPA5	3926 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	ERAL1	O75616	437 aa	Known RBP	13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	HSPA4L	O95757	839 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	F10	P00742	488 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	IGKV3-11	P04433	115 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	IL3	P08700	152 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	SSR4	P51571	173 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	SLC18A1	P54219	525 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	RNF4	P78317	190 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	RAE1	P78406	368 aa	Known RBP	13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	ZNF267	Q14586	743 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	NR6A1	Q15406	480 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	CHI3L2	Q15782	390 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	ZNF766	Q5HY98	468 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	FAM180A	Q6UWF9	173 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	RNF111	Q6ZNA4	994 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	IKBIP	Q70UQ0	350 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	SLC29A4	Q7RTT9	530 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	HDX	Q7Z353	690 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	TMEM156	Q8N614	296 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	AMER2	Q8N7J2	671 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	BCORP1	Q8N888	145 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	FAM98A	Q8NCA5	519 aa	Known RBP	13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	NUBPL	Q8TB37	319 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	ZNF721	Q8TF20	911 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	THAP3	Q8WTV1	239 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	TWIST2	Q8WVJ9	160 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	SNRNP40	Q96DI7	357 aa	Known RBP	13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	TMBIM4	Q9HC24	238 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	MYNN	Q9NPC7	610 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	LRFN1	Q9P244	771 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	MYOT	Q9UBF9	498 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	ZNF223	Q9UK11	482 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	UTS2R	Q9UKP6	389 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	DNAJC15	Q9Y5T4	150 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	COL12A1	Q99715	3063 aa		13.43	□□□□□ -0.26
ABCF3-211	ENST00000475728	TMEM120B	A0PK00	339 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	WDR91	A4D1P6	747 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	WASHC1	A8K0Z3	465 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	MAN1A2	O60476	641 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	ITGA10	O75578	1167 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	CRYAB	P02511	175 aa	Known RBP	13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	ATP1B1	P05026	303 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	NT5E	P21589	574 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	MAPK1	P28482	360 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	MAGOH	P61326	146 aa	Known RBP	13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	ERVK-8	P63133	956 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	AGBL2	Q5U5Z8	902 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	FAM219B	Q5XKK7	198 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	NOXRED1	Q6NXP6	359 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	OPN5	Q6U736	354 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	LRRC25	Q8N386	305 aa	Predicted RBP	13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	GOLGA6L1	Q8N7Z2	621 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	ANKRD42	Q8N9B4	389 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	MDS2	Q8NDY4	140 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	OR7G1	Q8NGA0	311 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	DNAJB8	Q8NHS0	232 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	ASB15	Q8WXK1	588 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	TLCD1	Q96CP7	247 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	PPP3R2	Q96LZ3	170 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	EBPL	Q9BY08	206 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	MIEF1	Q9NQG6	463 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	ERVK-19	Q9WJR5	959 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	ENTPD4	Q9Y227	616 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	CFL2	Q9Y281	166 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	CCL27	Q9Y4X3	112 aa		13.42	□□□□□ -0.26
ABCF3-211	ENST00000475728	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.41	□□□□□ -0.26
ABCF3-211	ENST00000475728	PIP5K1B	O14986	540 aa		13.41	□□□□□ -0.26
ABCF3-211	ENST00000475728	SLC25A12	O75746	678 aa		13.41	□□□□□ -0.26
ABCF3-211	ENST00000475728	RASAL1	O95294	804 aa		13.41	□□□□□ -0.26
ABCF3-211	ENST00000475728	SP1	P08047	785 aa		13.41	□□□□□ -0.26
ABCF3-211	ENST00000475728	LINC00032	P0C843	101 aa		13.41	□□□□□ -0.26
ABCF3-211	ENST00000475728	DDX5	P17844	614 aa	Known RBP	13.41	□□□□□ -0.26
ABCF3-211	ENST00000475728	DDC	P20711	480 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms