RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-218	ENST00000475445	UGT2B10	P36537	528 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	OR3A3	P47888	321 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	CCR8	P51685	355 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	CDK10	Q15131	360 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	FBXO43	Q4G163	708 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	IGSF11	Q5DX21	431 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	FAM78A	Q5JUQ0	283 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	SNAP47	Q5SQN1	464 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	METRNL	Q641Q3	311 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	CCDC103	Q8IW40	242 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	SMPDL3A	Q92484	453 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	TM4SF18	Q96CE8	201 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	ZFYVE19	Q96K21	471 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	IMPAD1	Q9NX62	359 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	KCND3	Q9UK17	655 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	PRKAB1	Q9Y478	270 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	COL4A3	Q01955	1670 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	EFCAB9	A8MZ26	197 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	C5orf58	C9J3I9	102 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	MPZL2	O60487	215 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	FRK	P42685	505 aa	Predicted RBP	13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	IDH2	P48735	452 aa	Known RBP	13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	CDK3	Q00526	305 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	FAM46C	Q5VWP2	391 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	CEACAM20	Q6UY09	585 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	BTLA	Q7Z6A9	289 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	PLD3	Q8IV08	490 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	ADGRF3	Q8IZF5	1079 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	MMP21	Q8N119	569 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	C7orf57	Q8NEG2	295 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	TTL	Q8NG68	377 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	OR9Q2	Q8NGE9	314 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	ASB16	Q96NS5	453 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	COL21A1	Q96P44	957 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	TNFRSF10D	Q9UBN6	386 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	SLC23A2	Q9UGH3	650 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	OSGIN1	Q9UJX0	560 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	ADAM29	Q9UKF5	820 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	DUSP12	Q9UNI6	340 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	SNX8	Q9Y5X2	465 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	PMF1-BGLAP	U3KQ54	211 aa		13.64	□□□□□ -0.23
GGA1-218	ENST00000475445	OTOL1	A6NHN0	477 aa	Predicted RBP	13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	PCP4L1	A6NKN8	68 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445		J3KTA2	159 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	CACNB4	O00305	520 aa	Predicted RBP	13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	BET1	O15155	118 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	PDE9A	O76083	593 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	SLC19A1	P41440	591 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	CNTN1	Q12860	1018 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	PDGFRL	Q15198	375 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	FAM92B	Q6ZTR7	304 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	MFSD4A	Q8N468	514 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	SMARCD2	Q92925	531 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	ZHX1-C8orf76	Q96EF9	292 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	IER2	Q9BTL4	223 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	BTBD2	Q9BX70	525 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	SLA2	Q9H6Q3	261 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	NARFL	Q9H6Q4	476 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	CDH23	Q9H251	3354 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	ERVH48-1	M5A8F1	160 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	TOR1B	O14657	336 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	PCDH17	O14917	1159 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	RECK	O95980	971 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	EVI2B	P34910	448 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	MANF	P55145	182 aa	Known RBP	13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	CDC42	P60953	191 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	IFITM3	Q01628	133 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	TIGD6	Q17RP2	521 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	PIP5KL1	Q5T9C9	394 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	RSBN1	Q5VWQ0	802 aa	Predicted RBP	13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	NUDT13	Q86X67	352 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	UTP15	Q8TED0	518 aa	Known RBP	13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	APOBEC4	Q8WW27	367 aa	Known RBP	13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	PROX1	Q92786	737 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	CRELD1	Q96HD1	420 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	F2RL3	Q96RI0	385 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	MENT	Q9BUN1	341 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	SLIRP	Q9GZT3	109 aa	Known RBP	13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	PRSS16	Q9NQE7	514 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	CAB39	Q9Y376	341 aa	Predicted RBP	13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	UGT2A1	Q9Y4X1	527 aa		13.63	□□□□□ -0.23
GGA1-218	ENST00000475445	SH3D21	A4FU49	640 aa		13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	GPR89A	B7ZAQ6	455 aa		13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	ATP6V1G2-DDX39B	F2Z307	99 aa		13.62	□□□□□ -0.23
GGA1-218	ENST00000475445		M0R082	166 aa		13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	PCCB	P05166	539 aa		13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	GPR89B	P0CG08	455 aa		13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	C21orf33	P30042	268 aa	Predicted RBP	13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	LIPA	P38571	399 aa		13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	IL12RB1	P42701	662 aa		13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	CTSK	P43235	329 aa		13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	CLK1	P49759	484 aa	Known RBP	13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	PCBP4	P57723	403 aa	Known RBP	13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	SRP54	P61011	504 aa	Known RBP	13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	POU6F2	P78424	691 aa	Predicted RBP	13.62	□□□□□ -0.23
GGA1-218	ENST00000475445	COLEC12	Q5KU26	742 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms