RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 FOLH1Q04609 750 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 COL9A2Q14055 689 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-210ENST00000475329 ZNF630Q2M218 657 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-210ENST00000475329 FAM98BQ52LJ0 330 aaKnown RBP12.92□□□□□ -0.34
TRAF4-210ENST00000475329 YOD1Q5VVQ6 348 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-210ENST00000475329 TMEM107Q6UX40 140 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 ZNF574Q6ZN55 896 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-210ENST00000475329 TMPRSS9Q7Z410 1059 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 C6orf120Q7Z4R8 191 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 TMEM126BQ8IUX1 230 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 SLC30A8Q8IWU4 369 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 EID3Q8N140 333 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 OR9A2Q8NGT5 310 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 FBXO30Q8TB52 745 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 NETO1Q8TDF5 533 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 NRG4Q8WWG1 115 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 MVB12AQ96EY5 273 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 MMABQ96EY8 250 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-210ENST00000475329 GFM1Q96RP9 751 aaKnown RBP12.92□□□□□ -0.34
TRAF4-210ENST00000475329 PKP2Q99959 881 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 NDC1Q9BTX1 674 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 UGT2B28Q9BY64 529 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 VCX3BQ9H321 246 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 ZCCHC3Q9NUD5 404 aaKnown RBP12.92□□□□□ -0.34
TRAF4-210ENST00000475329 DCAF13Q9NV06 445 aaKnown RBP12.92□□□□□ -0.34
TRAF4-210ENST00000475329 PDP2Q9P2J9 529 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 RIMS3Q9UJD0 308 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 SERTAD3Q9UJW9 196 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 V9GYQ6 96 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 IGHV5-10-1A0A0J9YXX1 117 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 FAM227AF5H4B4 570 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 CASQ2O14958 399 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 EMC8O43402 210 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 FGF17O60258 216 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 B4GALT2O60909 372 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 TIPRLO75663 272 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 LDOC1O95751 146 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 GPR75O95800 540 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 SERPINA1P01009 418 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 ARAFP10398 606 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 PORP16435 677 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 HOXB6P17509 224 aaKnown RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 MC3RP41968 323 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 KHKP50053 298 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 ARSFP54793 590 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 ACY1Q03154 408 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 CHRNB3Q05901 458 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 SCARB2Q14108 478 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 TRIP10Q15642 601 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 LRRC23Q53EV4 343 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 INTS11Q5TA45 600 aaKnown RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 CEACAM20Q6UY09 585 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 ERMP1Q7Z2K6 904 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 ARHGAP22Q7Z5H3 698 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 OR4N5Q8IXE1 308 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 LILRA2Q8N149 483 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 METTL27Q8N6F8 245 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 HORMAD2Q8N7B1 307 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 PAPD5Q8NDF8 572 aaKnown RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 TMEM52Q8NDY8 209 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 ZNF501Q96CX3 271 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 PEX11GQ96HA9 241 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 CNDP2Q96KP4 475 aaKnown RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 CCDC74BQ96LY2 380 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 SEPHS2Q99611 448 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 TACO1Q9BSH4 297 aaKnown RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 YY1AP1Q9H869 796 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 A4GALTQ9NPC4 353 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 FGF21Q9NSA1 209 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 THUMPD1Q9NXG2 353 aaKnown RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 RPS6KA6Q9UK32 745 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 CDC14AQ9UNH5 594 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 SAMD4AQ9UPU9 718 aaKnown RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 ANGPT4Q9Y264 503 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 CCDC88CQ9P219 2028 aa12.91□□□□□ -0.34
TRAF4-210ENST00000475329 COL27A1Q8IZC6 1860 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-210ENST00000475329 FER1L5A0AVI2 2057 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 D6RAR5 112 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 DSCR3O14972 297 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 LDB3O75112 727 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 SLITRK5O94991 958 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 RAP2AP10114 183 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 CKMT2P17540 419 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 KDELR2P33947 212 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 PTGER1P34995 402 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 GCGRP47871 477 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 RPS26P62854 115 aaKnown RBP12.9□□□□□ -0.34
TRAF4-210ENST00000475329 TXNL4AP83876 142 aaKnown RBP12.9□□□□□ -0.34
TRAF4-210ENST00000475329 MAT1AQ00266 395 aaKnown RBP12.9□□□□□ -0.34
TRAF4-210ENST00000475329 CDK6Q00534 326 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 ID2Q02363 134 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 C16orf72Q14CZ0 275 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 LTB4RQ15722 352 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 TNFAIP8L2Q6P589 184 aaPredicted RBP12.9□□□□□ -0.34
TRAF4-210ENST00000475329 ENPP6Q6UWR7 440 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 DBX2Q6ZNG2 339 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 TTLL10Q6ZVT0 673 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 ZNF595Q8IYB9 648 aa12.9□□□□□ -0.34
TRAF4-210ENST00000475329 TMEM102Q8N9M5 508 aaPredicted RBP12.9□□□□□ -0.34
TRAF4-210ENST00000475329 NFKBIDQ8NI38 313 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms