RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 MMP21Q8N119 569 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 BANPQ8N9N5 519 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 FAIM2Q9BWQ8 316 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 SHCBP1LQ9BZQ2 653 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 TSPAN10Q9H1Z9 355 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-223ENST00000475146 TIMMDC1Q9NPL8 285 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 ERRFI1Q9UJM3 462 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-223ENST00000475146 PLLPQ9Y342 182 aa22.28■■□□□ 1.16
CPNE1-223ENST00000475146 PCDH7O60245 1069 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 SPAG7O75391 227 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 NT5EP21589 574 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 GALNSP34059 522 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 ALDH9A1P49189 494 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 XKP51811 444 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 BTKQ06187 659 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 PCLAFQ15004 111 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 SPIN4Q56A73 249 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 SLC48A1Q6P1K1 146 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 RNF111Q6ZNA4 994 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 MDGA2Q7Z553 956 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 MREGQ8N565 214 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 CPSF7Q8N684 471 aaKnown RBP22.27■■□□□ 1.16
CPNE1-223ENST00000475146 NUBPLQ8TB37 319 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 TM4SF18Q96CE8 201 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 GAL3ST4Q96RP7 486 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 MCM8Q9UJA3 840 aa22.27■■□□□ 1.16
CPNE1-223ENST00000475146 ZGRF1Q86YA3 2104 aa22.27■■□□□ 1.15
CPNE1-223ENST00000475146 GNG14A0A1W2PPG7 69 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 NPIPA5E9PKD4 350 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 CPMP14384 443 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 ZNF24P17028 368 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 MEOX1P50221 254 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 TRA2BP62995 288 aaKnown RBP22.26■■□□□ 1.15
CPNE1-223ENST00000475146 ASPHQ12797 758 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 IMPG1Q17R60 797 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 ZNF750Q32MQ0 723 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 SPDYAQ5MJ70 313 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 SLC29A4Q7RTT9 530 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 GALNT12Q8IXK2 581 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 APIPQ96GX9 242 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 FAM111AQ96PZ2 611 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 SMC6Q96SB8 1091 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 CXorf21Q9HAI6 301 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 NPIPA1Q9UND3 350 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 PRRC2CQ9Y520 2896 aaKnown RBP22.26■■□□□ 1.15
CPNE1-223ENST00000475146 HIVEP3Q5T1R4 2406 aa22.26■■□□□ 1.15
CPNE1-223ENST00000475146 GOLGA6L10A6NI86 522 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 KLRC4-KLRK1H3BQV0 150 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 PEX1O43933 1283 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 ERAL1O75616 437 aaKnown RBP22.25■■□□□ 1.15
CPNE1-223ENST00000475146 RNF224P0DH78 156 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 SERPINB3P29508 390 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 GPR85P60893 370 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 KRT71Q3SY84 523 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 OPN5Q6U736 354 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 SULF2Q8IWU5 870 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 PSD4Q8NDX1 1056 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 SLC22A8Q8TCC7 542 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 KLHL29Q96CT2 875 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 EBPLQ9BY08 206 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 SLC17A7Q9P2U7 560 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 RAB21Q9UL25 225 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 PSME2Q9UL46 239 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 FLNCQ14315 2725 aa22.25■■□□□ 1.15
CPNE1-223ENST00000475146 POLEQ07864 2286 aa22.24■■□□□ 1.15
CPNE1-223ENST00000475146 TRIM13O60858 407 aa22.24■■□□□ 1.15
CPNE1-223ENST00000475146 PORP16435 677 aaPredicted RBP22.24■■□□□ 1.15
CPNE1-223ENST00000475146 SSTR4P31391 388 aa22.24■■□□□ 1.15
CPNE1-223ENST00000475146 TIA1P31483 386 aaKnown RBP eCLIP22.24■■□□□ 1.15
CPNE1-223ENST00000475146 RAE1P78406 368 aaKnown RBP22.24■■□□□ 1.15
CPNE1-223ENST00000475146 RBPJQ06330 500 aa22.24■■□□□ 1.15
CPNE1-223ENST00000475146 MPEG1Q2M385 716 aa22.24■■□□□ 1.15
CPNE1-223ENST00000475146 C4orf17Q53FE4 359 aa22.24■■□□□ 1.15
CPNE1-223ENST00000475146 RTL4Q6ZR62 310 aa22.24■■□□□ 1.15
CPNE1-223ENST00000475146 GPR137Q96N19 417 aa22.24■■□□□ 1.15
CPNE1-223ENST00000475146 TMEM109Q9BVC6 243 aa22.24■■□□□ 1.15
CPNE1-223ENST00000475146 GATA5Q9BWX5 397 aaPredicted RBP22.24■■□□□ 1.15
CPNE1-223ENST00000475146 TNFRSF12AQ9NP84 129 aa22.24■■□□□ 1.15
CPNE1-223ENST00000475146 CES1P1Q9UKY3 287 aa22.24■■□□□ 1.15
CPNE1-223ENST00000475146 DLGAP4Q9Y2H0 992 aa22.24■■□□□ 1.15
CPNE1-223ENST00000475146 SERTM1A2A2V5 107 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 OR6C76A6NM76 312 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 LRRTM2O43300 516 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 ZNF354AO60765 605 aaPredicted RBP22.23■■□□□ 1.15
CPNE1-223ENST00000475146 WISP2O76076 250 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 IL3P08700 152 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 CT62P0C5K7 136 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 ALDH3A1P30838 453 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 FEN1P39748 380 aaKnown RBP22.23■■□□□ 1.15
CPNE1-223ENST00000475146 RFC3P40938 356 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 SLC37A1P57057 533 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 PIGGQ5H8A4 983 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 C1QL3Q5VWW1 255 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 POGLUT1Q8NBL1 392 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 TCP10LQ8TDR4 215 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 WWTR1Q9GZV5 400 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 PFDN4Q9NQP4 134 aa22.23■■□□□ 1.15
CPNE1-223ENST00000475146 LRRK2Q5S007 2527 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 TFECO14948 347 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-223ENST00000475146 CLPSP04118 112 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms