RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 SCARF1Q14162 830 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 KCNJ11Q14654 390 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 OR8G1Q15617 311 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 BSXQ3C1V8 233 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 XKR6Q5GH73 641 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PEAR1Q5VY43 1037 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 RAET1LQ5VY80 246 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 LIPMQ5VYY2 423 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 LHX8Q68G74 356 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 ULK3Q6PHR2 472 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 NCEH1Q6PIU2 408 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 LINGO2Q7L985 606 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 TMPRSS7Q7RTY8 843 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 B3GNT8Q7Z7M8 397 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 C17orf78Q8N4C9 275 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 CCDC71LQ8N9Z2 235 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 DMBX1Q8NFW5 382 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 DYNC2LI1Q8TCX1 351 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 ZNF599Q96NL3 588 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 QKIQ96PU8 341 aaKnown RBP eCLIP3.31□□□□□ -1.882e-6■■■■□ 25.4
UBR3-208ENST00000474426 OR14A2Q96R54 314 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 PCDHB18PQ96TA0 734 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 G6PC3Q9BUM1 346 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 ACTRT3Q9BYD9 372 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 GPN1Q9HCN4 374 aaPredicted RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 SLC22A11Q9NSA0 550 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 DBNLQ9UJU6 430 aaKnown RBP3.31□□□□□ -1.88
UBR3-208ENST00000474426 STOML2Q9UJZ1 356 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 WNT6Q9Y6F9 365 aa3.31□□□□□ -1.88
UBR3-208ENST00000474426 HYKKA2RU49 373 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 C9orf172C9J069 976 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 CXCR6O00574 342 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ZNF749O43361 778 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ITM2AO43736 263 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 DUX1O43812 170 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 RBMXL2O75526 392 aaKnown RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 TDP2O95551 362 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ACTL6AO96019 429 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PAEPP09466 180 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 UBCP0CG48 685 aaKnown RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 B4GALT1P15291 398 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 KCNE1P15382 129 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 NPR2P20594 1047 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 SLC6A1P30531 599 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 MAGEA6P43360 314 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 LHX1P48742 406 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 RGS4P49798 205 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ZP1P60852 638 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 DUSP6Q16828 381 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 RNF212Q495C1 297 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PABPC1L2AQ5JQF8 200 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 TTC23Q5W5X9 447 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PRR5LQ6MZQ0 368 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ADGRG3Q86Y34 549 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 DCUN1D3Q8IWE4 304 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 GPALPP1Q8IXQ4 340 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 UBQLNLQ8IYU4 475 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 C9orf62Q8N4C0 152 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 SPATA6LQ8N4H0 392 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 OR4M1Q8NGD0 313 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 OR5B17Q8NGF7 314 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 OR13C9Q8NGT0 318 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 HM13Q8TCT9 377 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 SCARB1Q8WTV0 552 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 CREB3L1Q96BA8 519 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 C3orf49Q96BT1 292 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PABPC5Q96DU9 382 aaKnown RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 DUX5Q96PT3 197 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 OR5B2Q96R09 309 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 CNN2Q99439 309 aaKnown RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 STACQ99469 402 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 TLE6Q9H808 572 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 NT5DC2Q9H857 520 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 RAB18Q9NP72 206 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 MYNNQ9NPC7 610 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 OR2S2Q9NQN1 319 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 G6PC2Q9NQR9 355 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 NECTIN3Q9NQS3 549 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 NANSQ9NR45 359 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PLSCR3Q9NRY6 295 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ACSS1Q9NUB1 689 aaPredicted RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 CRIM1Q9NZV1 1036 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PIM2Q9P1W9 311 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 DBR1Q9UK59 544 aaKnown RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 DYRK1BQ9Y463 629 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 POLR3HQ9Y535 204 aaPredicted RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 RIMS2Q9UQ26 1411 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 TCHHQ07283 1943 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 A0A1B0GVM2 712 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 A0A1W2PQ27 194 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 A0A1W2PQ64 194 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 A0A1W2PQC6 194 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PRSS37A4D1T9 235 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 OOEPA6NGQ2 149 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 ZNF99A8MXY4 864 aaPredicted RBP3.3□□□□□ -1.88
UBR3-208ENST00000474426 E9PQ18 207 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 H3BNX3 289 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 I3L521 148 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PHYHO14832 338 aa3.3□□□□□ -1.88
UBR3-208ENST00000474426 PMPCBO75439 489 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms