RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CLEC6AQ6EIG7 209 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 SLC48A1Q6P1K1 146 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 RNF111Q6ZNA4 994 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 C16orf47Q6ZP98 133 aaPredicted RBP13.21□□□□□ -0.3
VAMP4-203ENST00000474047 DGAT2L6Q6ZPD8 337 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 SLC29A4Q7RTT9 530 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 GALNTL5Q7Z4T8 443 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 OR8K3Q8NH51 312 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 CDC26Q8NHZ8 85 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 KCNK9Q9NPC2 374 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 HPF1Q9NWY4 346 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 DLGAP4Q9Y2H0 992 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 BSNQ9UPA5 3926 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 SLC28A1O00337 649 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 NPHS1O60500 1241 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 NEURL1O76050 574 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 CBX6O95503 412 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 ANXA4P09525 319 aaPredicted RBP13.2□□□□□ -0.3
VAMP4-203ENST00000474047 NEFHP12036 1026 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 EDN3P14138 238 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 CPMP14384 443 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 CSNK2A2P19784 350 aaPredicted RBP13.2□□□□□ -0.3
VAMP4-203ENST00000474047 TIA1P31483 386 aaKnown RBP eCLIP13.2□□□□□ -0.3
VAMP4-203ENST00000474047 HK2P52789 917 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 SPRED3Q2MJR0 410 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 HLA-DQA1Q5Y7H0 255 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 IL20RBQ6UXL0 311 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 NUDCD3Q8IVD9 361 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 GALNT12Q8IXK2 581 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 GPALPP1Q8IXQ4 340 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 ARMC10Q8N2F6 343 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 ST6GALNAC3Q8NDV1 305 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 TAAR6Q96RI8 345 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 GAL3ST4Q96RP7 486 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 EBPLQ9BY08 206 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 HES7Q9BYE0 225 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 STMN4Q9H169 189 aaPredicted RBP13.2□□□□□ -0.3
VAMP4-203ENST00000474047 TIMMDC1Q9NPL8 285 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 GIMAP4Q9NUV9 329 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 KLF13Q9Y2Y9 288 aaPredicted RBP13.2□□□□□ -0.3
VAMP4-203ENST00000474047 ESPL1Q14674 2120 aa13.2□□□□□ -0.3
VAMP4-203ENST00000474047 HRKO00198 91 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 RGS14O43566 566 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 SEC22BO75396 215 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 IL3P08700 152 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 DRD2P14416 443 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 FEN1P39748 380 aaKnown RBP13.19□□□□□ -0.3
VAMP4-203ENST00000474047 PMP22Q01453 160 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 HEPACAMQ14CZ8 416 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 OPN5Q6U736 354 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 LRIG3Q6UXM1 1119 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 ZCCHC23Q6ZST2 131 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 TRIM46Q7Z4K8 759 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.19□□□□□ -0.3
VAMP4-203ENST00000474047 MMP21Q8N119 569 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 SLC22A8Q8TCC7 542 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 C16orf78Q8WTQ4 265 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 SCMH1Q96GD3 660 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 RASL10BQ96S79 203 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 BARD1Q99728 777 aaKnown RBP13.19□□□□□ -0.3
VAMP4-203ENST00000474047 BRINP2Q9C0B6 783 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 CXorf21Q9HAI6 301 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 UTS2RQ9UKP6 389 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 MYO18BQ8IUG5 2567 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 KLRC4-KLRK1H3BQV0 150 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 TYROBPO43914 113 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 NME2P1O60361 137 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 RSL1D1O76021 490 aaKnown RBP13.19□□□□□ -0.3
VAMP4-203ENST00000474047 AGFG2O95081 481 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 BPGMP07738 259 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 NME2P22392 152 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 GSTM5P46439 218 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 RAE1P78406 368 aaKnown RBP13.19□□□□□ -0.3
VAMP4-203ENST00000474047 ALDH6A1Q02252 535 aaKnown RBP13.19□□□□□ -0.3
VAMP4-203ENST00000474047 UBAP2LQ14157 1087 aaKnown RBP13.19□□□□□ -0.3
VAMP4-203ENST00000474047 ZNF750Q32MQ0 723 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 ARL13AQ5H913 290 aaPredicted RBP13.19□□□□□ -0.3
VAMP4-203ENST00000474047 EXOC3L1Q86VI1 746 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 DDIASQ8IXT1 998 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 CLYBLQ8N0X4 340 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 FAM26EQ8N5C1 309 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 AGR3Q8TD06 166 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 NR4A3Q92570 626 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 TRIM45Q9H8W5 580 aaPredicted RBP13.19□□□□□ -0.3
VAMP4-203ENST00000474047 TNFRSF12AQ9NP84 129 aa13.19□□□□□ -0.3
VAMP4-203ENST00000474047 PRRC2CQ9Y520 2896 aaKnown RBP13.18□□□□□ -0.3
VAMP4-203ENST00000474047 CROCCQ5TZA2 2017 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 A0A1W2PS29 197 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 WDR91A4D1P6 747 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 TMEM200CA6NKL6 621 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 OR6C76A6NM76 312 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 OR6B1O95007 311 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 IGKV3-11P04433 115 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 CHRNGP07510 517 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 LINC00032P0C843 101 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 SSTR4P31391 388 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 SOX3P41225 446 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 SRSF11Q05519 484 aaKnown RBP13.18□□□□□ -0.3
VAMP4-203ENST00000474047 ZNF763Q0D2J5 394 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 C2orf80Q0P641 193 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms