RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ANKRD28O15084 1053 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 KIAA0513O60268 411 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 UGDHO60701 494 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 RAD17O75943 681 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 KRT33AO76009 404 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 LRG1P02750 347 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 APRTP07741 180 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CLUP10909 449 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CYP4B1P13584 511 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 XPAP23025 273 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC6A2P23975 617 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 AZGP1P25311 298 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 HTR1EP28566 365 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 THBS2P35442 1172 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 STAT5BP51692 787 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 DEFA5Q01523 94 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 C2orf80Q0P641 193 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ILF3Q12906 894 aaKnown RBP eCLIP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 GBX1Q14549 363 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 IRF4Q15306 451 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PTCHD3Q3KNS1 767 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 UGT3A2Q3SY77 523 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 KLHL22Q53GT1 634 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ACER2Q5QJU3 275 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 B3GNTL1Q67FW5 361 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 DHRS7BQ6IAN0 325 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 TRMT10BQ6PF06 316 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 FAM131AQ6UXB0 335 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 VITQ6UXI7 678 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 NPSR1Q6W5P4 371 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 RBMS3Q6XE24 437 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 KANSL1Q7Z3B3 1105 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 FJX1Q86VR8 437 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SPAG16Q8N0X2 631 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 OR6B3Q8NGW1 331 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 FEZF2Q8TBJ5 459 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 WDR20Q8TBZ3 569 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SCARB1Q8WTV0 552 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 TMEM174Q8WUU8 243 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 UCN3Q969E3 161 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 MRPS24Q96EL2 167 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 FOXB1Q99853 325 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 KCNS3Q9BQ31 491 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SOX7Q9BT81 388 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 H2AFJQ9BTM1 129 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 EDEM2Q9BV94 578 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PRDM12Q9H4Q4 367 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 EVA1AQ9H8M9 152 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 GALNT9Q9HCQ5 603 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SLAMF7Q9NQ25 335 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 GLRX2Q9NS18 164 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 NSMCE4AQ9NXX6 385 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 GTSE1Q9NYZ3 720 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CPA4Q9UI42 421 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ZDHHC2Q9UIJ5 367 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 MAGEL2Q9UJ55 1249 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 POMT2Q9UKY4 750 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 HCFC2Q9Y5Z7 792 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 TP53BP1Q12888 1972 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 C7orf66A4D0T2 115 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 NEDD8-MDP1E9PL57 170 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 APOC4-APOC2K7ER74 178 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 LGALS8O00214 317 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 LCMT2O60294 686 aaKnown RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 APOC2P02655 101 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 LPLP06858 475 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 SDHBP21912 280 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 FMO3P31513 532 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 GSK3BP49841 420 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 RORCP51449 518 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 GLO1Q04760 184 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 YWHAHQ04917 246 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 CHRNB3Q05901 458 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 MXD4Q14582 209 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 SF3A2Q15428 464 aaKnown RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 FCN2Q15485 313 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 TAZQ16635 292 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF284Q2VY69 593 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 C1orf141Q5JVX7 400 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 DDI2Q5TDH0 399 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 PRAMEF18Q5VWM3 479 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 TRIQKQ629K1 86 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 RAET1GQ6H3X3 334 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 ARHGAP11AQ6P4F7 1023 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 CFAP161Q6P656 301 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 FAM198BQ6UWH4 519 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 GDPGP1Q6ZNW5 385 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 CLEC14AQ86T13 490 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 TMEM17Q86X19 198 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 ENTHD1Q8IYW4 607 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 DNAJC22Q8N4W6 341 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 OR11H4Q8NGC9 324 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 OR5K1Q8NHB7 308 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 DTD1Q8TEA8 209 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 TSPEARQ8WU66 669 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 TCTEX1D2Q8WW35 142 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 HTR3CQ8WXA8 447 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 DDX17Q92841 729 aaKnown RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 POP5Q969H6 163 aaKnown RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 UPRTQ96BW1 309 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms