RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 VPS39Q96JC1 886 aa13.13□□□□□ -0.31
TARDBP-204ENST00000472476 JSRP1Q96MG2 331 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-204ENST00000472476 DGAT2Q96PD7 388 aa13.13□□□□□ -0.31
TARDBP-204ENST00000472476 MDFIQ99750 246 aa13.13□□□□□ -0.31
TARDBP-204ENST00000472476 ZNF717Q9BY31 904 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-204ENST00000472476 ROGDIQ9GZN7 287 aa13.13□□□□□ -0.31
TARDBP-204ENST00000472476 WWTR1Q9GZV5 400 aa13.13□□□□□ -0.31
TARDBP-204ENST00000472476 OR51B5Q9H339 312 aa13.13□□□□□ -0.31
TARDBP-204ENST00000472476 RHOJQ9H4E5 214 aa13.13□□□□□ -0.31
TARDBP-204ENST00000472476 RPF2Q9H7B2 306 aaKnown RBP13.13□□□□□ -0.31
TARDBP-204ENST00000472476 WWOXQ9NZC7 414 aa13.13□□□□□ -0.31
TARDBP-204ENST00000472476 FOXD3Q9UJU5 478 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-204ENST00000472476 EDARQ9UNE0 448 aa13.13□□□□□ -0.31
TARDBP-204ENST00000472476 SLC6A5Q9Y345 797 aa13.13□□□□□ -0.31
TARDBP-204ENST00000472476 C15orf38-AP3S2A0A0A6YYH1 394 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 A0A1W2PS29 197 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 MBD3L4A6NDZ8 208 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-204ENST00000472476 MBD3L3A6NE82 208 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-204ENST00000472476 MBD3L5A6NJ08 208 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-204ENST00000472476 INHBBP09529 407 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 BMP7P18075 431 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 SERPINB3P29508 390 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 SLCO1A2P46721 670 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 CDK9P50750 372 aaKnown RBP13.12□□□□□ -0.31
TARDBP-204ENST00000472476 HERVK_113P63132 956 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 ERVK-8P63133 956 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 TBL3Q12788 808 aaKnown RBP13.12□□□□□ -0.31
TARDBP-204ENST00000472476 CBLBQ13191 982 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 SLAMF1Q13291 335 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 LAPTM5Q13571 262 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 AP5B1Q2VPB7 878 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 TMEM35AQ53FP2 167 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 NHSL2Q5HYW2 709 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 DEPDC1Q5TB30 811 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 OR4C11Q6IEV9 310 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 TCAIMQ8N3R3 496 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 SRFBP1Q8NEF9 429 aaKnown RBP13.12□□□□□ -0.31
TARDBP-204ENST00000472476 OR7G3Q8NG95 312 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 MBD3L2Q8NHZ7 208 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-204ENST00000472476 TANKQ92844 425 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 UBXN10Q96LJ8 280 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 GNRHR2Q96P88 292 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 DOHHQ9BU89 302 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 ERVK-6Q9BXR3 956 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 UGT2B28Q9BY64 529 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 ANGPTL4Q9BY76 406 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 CD244Q9BZW8 370 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 MTRF1LQ9UGC7 380 aaKnown RBP13.12□□□□□ -0.31
TARDBP-204ENST00000472476 ERVK-19Q9WJR5 959 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 ASB4Q9Y574 426 aa13.12□□□□□ -0.31
TARDBP-204ENST00000472476 CD8B2A6NJW9 211 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 CLCA1A8K7I4 914 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 CXorf49A8MYA2 514 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-204ENST00000472476 E7ESA3 106 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 PHGDHO43175 533 aaKnown RBP13.11□□□□□ -0.31
TARDBP-204ENST00000472476 IL2RAP01589 272 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 CCDC166P0CW27 439 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 COX7A2P14406 83 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 ALOX15P16050 662 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-204ENST00000472476 CTSSP25774 331 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 GDF1P27539 372 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 FBXW4P57775 412 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 IRF8Q02556 426 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 FOXF2Q12947 444 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 KEAP1Q14145 624 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 ZNF267Q14586 743 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-204ENST00000472476 SPRED3Q2MJR0 410 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 KHDRBS2Q5VWX1 349 aaKnown RBP13.11□□□□□ -0.31
TARDBP-204ENST00000472476 MRM1Q6IN84 353 aaKnown RBP13.11□□□□□ -0.31
TARDBP-204ENST00000472476 GPR180Q86V85 440 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 DND1Q8IYX4 353 aaKnown RBP13.11□□□□□ -0.31
TARDBP-204ENST00000472476 ST13P4Q8IZP2 240 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-204ENST00000472476 SLC35F6Q8N357 371 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 LIX1Q8N485 282 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 C9orf106Q8NAJ2 232 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 FBXO36Q8NEA4 188 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 GAL3ST4Q96RP7 486 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 PHACTR1Q9C0D0 580 aa13.11□□□□□ -0.31
TARDBP-204ENST00000472476 CNOT10Q9H9A5 744 aaKnown RBP13.11□□□□□ -0.31
TARDBP-204ENST00000472476 HEATR5AQ86XA9 2040 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 A0A1W2PR48 441 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 KIAA1324LA8MWY0 1029 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-204ENST00000472476 PLPP1O14494 284 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 CCNT2O60583 730 aaKnown RBP13.1□□□□□ -0.31
TARDBP-204ENST00000472476 EEDO75530 441 aaKnown RBP13.1□□□□□ -0.31
TARDBP-204ENST00000472476 GPR75O95800 540 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 LY6G6DO95868 133 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 CASP3P42574 277 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 SSR2P43308 183 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 NAGLUP54802 743 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 DCAF7P61962 342 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 SORDQ00796 357 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 POU4F1Q01851 419 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 TNFRSF17Q02223 184 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 DLG1Q12959 904 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 BIKQ13323 160 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 HIST2H2ACQ16777 129 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-204ENST00000472476 EIPR1Q53HC9 387 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 HIST2H2AA3Q6FI13 130 aa13.1□□□□□ -0.31
TARDBP-204ENST00000472476 CLEC9AQ6UXN8 241 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms