RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 MRPL1Q9BYD6 325 aaKnown RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 PHACTR1Q9C0D0 580 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 SLC6A15Q9H2J7 730 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 ANKRA2Q9H9E1 313 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 PRM3Q9NNZ6 103 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 CHST11Q9NPF2 352 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 ALKBH4Q9NXW9 302 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 Q9UFV3 132 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 UTP11Q9Y3A2 253 aaKnown RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 CHCHD2Q9Y6H1 151 aaPredicted RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 ANKHD1Q8IWZ3 2542 aaKnown RBP7.44□□□□□ -1.22
USP48-207ENST00000471752 ZANQ9Y493 2812 aa7.44□□□□□ -1.22
USP48-207ENST00000471752 NINQ8N4C6 2090 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 B4DXG7 233 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 H0YIV9 168 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 IGHG3P01860 377 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 KLK1P06870 262 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 GSTA2P09210 222 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 GFAPP14136 432 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 ALOX15P16050 662 aaPredicted RBP7.43□□□□□ -1.22
USP48-207ENST00000471752 PTX3P26022 381 aaPredicted RBP7.43□□□□□ -1.22
USP48-207ENST00000471752 TYK2P29597 1187 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 PIK3CBP42338 1070 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 MAGEA12P43365 314 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 SLC37A1P57057 533 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 FBXW4P57775 412 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 TNFRSF17Q02223 184 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 TRAF3Q13114 568 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 ACAP2Q15057 778 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 PCBP2Q15366 365 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP48-207ENST00000471752 TMEM35AQ53FP2 167 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 TECRLQ5HYJ1 363 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 PAGE2BQ5JRK9 111 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 MTFR2Q6P444 385 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 ARHGAP11AQ6P4F7 1023 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 RTL4Q6ZR62 310 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 GDF7Q7Z4P5 450 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 ZNF441Q8N8Z8 693 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 L3MBTL4Q8NA19 623 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 POGLUT1Q8NBL1 392 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 NAXEQ8NCW5 288 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 LRRN4CLQ8ND94 238 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 RHEBL1Q8TAI7 183 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 CA5BP1Q8WTZ4 195 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 PHF10Q8WUB8 498 aaKnown RBP7.43□□□□□ -1.22
USP48-207ENST00000471752 DCAKDQ8WVC6 231 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 IFT81Q8WYA0 676 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 DGAT2Q96PD7 388 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 GAL3ST4Q96RP7 486 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 SMC6Q96SB8 1091 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 SPOCK3Q9BQ16 436 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 FAM173AQ9BQD7 235 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 TTYH2Q9BSA4 534 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 CDC42EP4Q9H3Q1 356 aaKnown RBP7.43□□□□□ -1.22
USP48-207ENST00000471752 DDX31Q9H8H2 851 aaKnown RBP7.43□□□□□ -1.22
USP48-207ENST00000471752 ACTR8Q9H981 624 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 SACM1LQ9NTJ5 587 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 PCTPQ9UKL6 214 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 CES1P1Q9UKY3 287 aa7.43□□□□□ -1.22
USP48-207ENST00000471752 CNOT11Q9UKZ1 510 aaKnown RBP7.43□□□□□ -1.22
USP48-207ENST00000471752 MRPS33Q9Y291 106 aaKnown RBP7.43□□□□□ -1.22
USP48-207ENST00000471752 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.43□□□□□ -1.22
USP48-207ENST00000471752 FLNAP21333 2647 aaKnown RBP7.43□□□□□ -1.22
USP48-207ENST00000471752 NCKAP5O14513 1909 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 A0A087X1B8 175 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 A0A088AWK7 358 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 A0A1B0GVC2 190 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 FBXO45P0C2W1 286 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 ZNF10P21506 573 aaPredicted RBP7.42□□□□□ -1.22
USP48-207ENST00000471752 ACVR2AP27037 513 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 GSTM2P28161 218 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 STX2P32856 288 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 PTGER4P35408 488 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 XKP51811 444 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 RAP1GDS1P52306 607 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 AGFG1P52594 562 aaKnown RBP7.42□□□□□ -1.22
USP48-207ENST00000471752 ALDH18A1P54886 795 aaKnown RBP7.42□□□□□ -1.22
USP48-207ENST00000471752 CAV1Q03135 178 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 TGM3Q08188 693 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 SERTAD2Q14140 314 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 SLC10A1Q14973 349 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 EXOSC7Q15024 291 aaKnown RBP7.42□□□□□ -1.22
USP48-207ENST00000471752 EBPQ15125 230 aaKnown RBP7.42□□□□□ -1.22
USP48-207ENST00000471752 NNATQ16517 81 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 FAM83EQ2M2I3 478 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 MPEG1Q2M385 716 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 DCST1Q5T197 706 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 LIPJQ5W064 366 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 SLC22A10Q63ZE4 541 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 LETMD1Q6P1Q0 360 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 POMZP3Q6PJE2 187 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 ZCCHC7Q8N3Z6 543 aaKnown RBP7.42□□□□□ -1.22
USP48-207ENST00000471752 ZNF615Q8N8J6 731 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 FAM13CQ8NE31 585 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 ADCY4Q8NFM4 1077 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 OR10Q1Q8NGQ4 319 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 OR8K3Q8NH51 312 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 PAQR8Q8TEZ7 354 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 SLC44A1Q8WWI5 657 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 TANKQ92844 425 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms