RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 DUOXA1Q1HG43 343 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 KIAA0895LQ68EN5 471 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 Q6ZVL8 140 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 B3GNT2Q9NY97 397 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HCN4Q9Y3Q4 1203 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DLC1Q96QB1 1528 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SLC1A7O00341 560 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ITM2AO43736 263 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SYPP08247 313 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ANXA8P13928 327 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ACADVLP49748 655 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ERVK-16P61578 105 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR2T5Q6IEZ7 315 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OR2T29Q8NH02 315 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TMEM109Q9BVC6 243 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ZNF446Q9NWS9 450 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 HCRTO43612 131 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 MT-CO2P00403 227 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 OAS1P00973 400 aaKnown RBP12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 IFNA5P01569 189 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 THBS2P35442 1172 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RBPJQ06330 500 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GALNT1Q10472 559 aaPredicted RBP12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ASTE1Q2TB18 679 aaPredicted RBP12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LRIF1Q5T3J3 769 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GOLGA7Q7Z5G4 137 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 S100A7AQ86SG5 101 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GALNT12Q8IXK2 581 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FCAMRQ8WWV6 532 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 PFDN5Q99471 154 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DHRS9Q9BPW9 319 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RPH3ALQ9UNE2 315 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 NPHS1O60500 1241 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 ABCB7O75027 752 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RFPL2O75678 378 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 EPHA1P21709 976 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 SLC2A5P22732 501 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 TXNDC5Q8NBS9 432 aaKnown RBP12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 GLYATL1Q969I3 302 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 FUCA2Q9BTY2 467 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 RBM24Q9BX46 236 aaKnown RBP12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 DHDHQ9UQ10 334 aa12.71□□□□□ -0.37
NPHP3-ACAD11-201ENST00000471702 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CSF2RAP15509 400 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 FXYD4P59646 89 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 DLX2Q07687 328 aaPredicted RBP12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 DCST2Q5T1A1 773 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ABHD17BQ5VST6 288 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 Q8N402 240 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 L3MBTL4Q8NA19 623 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 NPRL2Q8WTW4 380 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 NSUN3Q9H649 340 aaKnown RBP12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SMCO4Q9NRQ5 59 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 RLIMQ9NVW2 624 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 THUMPD1Q9NXG2 353 aaKnown RBP12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PCDHGA2Q9Y5H1 932 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 HS3ST4Q9Y661 456 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 H3BML4 177 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SLC6A6P31641 620 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 KHDC1Q4VXA5 237 aaKnown RBP12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZNF584Q8IVC4 421 aa12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 FUBP3Q96I24 572 aaKnown RBP eCLIP12.71□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 AGTR2P50052 363 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 NCS1P62166 190 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 DEFB110Q30KQ9 67 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 DCUN1D3Q8IWE4 304 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CANT1Q8WVQ1 401 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 MSI2Q96DH6 328 aaKnown RBP12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 MCHR1Q99705 422 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TTYH3Q9C0H2 523 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 POMPQ9Y244 141 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 EPCAMP16422 314 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZNF616Q08AN1 781 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 RSU1Q15404 277 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 DPY19L1Q2PZI1 675 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TRIM46Q7Z4K8 759 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SARDHQ9UL12 918 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 INSL5Q9Y5Q6 135 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 IFNA7P01567 189 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PON2Q15165 354 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PPA1Q15181 289 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 KATNBL1Q9H079 304 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TFB2MQ9H5Q4 396 aaKnown RBP12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZDHHC2Q9UIJ5 367 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 VSTM2BA6NLU5 285 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TULP2O00295 520 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ENSAO43768 121 aaKnown RBP12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 MAS1P04201 325 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 RHOP08100 348 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 G6PDP11413 515 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 OR9I1Q8NGQ6 314 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TMBIM1Q969X1 311 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 UBE2J1Q9Y385 318 aaPredicted RBP12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 A0A0G2JLL6 359 aaPredicted RBP12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 H3BQ06 376 aaPredicted RBP12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CDK2AP1O14519 115 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SERPINA7P05543 415 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CKMT1AP12532 417 aa12.7□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PMPCAQ10713 525 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms