RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 SLAMF1Q13291 335 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 C3AR1Q16581 482 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 TSNAXIP1Q2TAA8 658 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 TECRLQ5HYJ1 363 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 SP5Q6BEB4 398 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-211ENST00000471260 MRGPRGQ86SM5 289 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 MYLK4Q86YV6 388 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-211ENST00000471260 ASB15Q8WXK1 588 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 ANKRD9Q96BM1 317 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-211ENST00000471260 RBM18Q96H35 190 aaKnown RBP12.54□□□□□ -0.4
HMGN1-211ENST00000471260 ART5Q96L15 291 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 OR51B5Q9H339 312 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 RUBCNLQ9H714 662 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 RPF2Q9H7B2 306 aaKnown RBP12.54□□□□□ -0.4
HMGN1-211ENST00000471260 IPPKQ9H8X2 491 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 CHST11Q9NPF2 352 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 HPF1Q9NWY4 346 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 NOP53Q9NZM5 478 aaKnown RBP12.54□□□□□ -0.4
HMGN1-211ENST00000471260 COPS7AQ9UBW8 275 aa12.54□□□□□ -0.4
HMGN1-211ENST00000471260 GTF3C1Q12789 2109 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 TMEM200CA6NKL6 621 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 C17orf105B2RV13 164 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 PRSS44E7EML9 344 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 STX16-NPEPL1H3BU86 382 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 PLPP1O14494 284 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 STX16O14662 325 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 PRKNO60260 465 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-211ENST00000471260 OR2J2O76002 312 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 CLDN9O95484 217 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 ABOP16442 354 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 KRT4P19013 534 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 BUD31P41223 144 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-211ENST00000471260 STT3AP46977 705 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 SMSP52788 366 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 RNF4P78317 190 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 DDX39BQ13838 428 aaKnown RBP12.53□□□□□ -0.4
HMGN1-211ENST00000471260 MPEG1Q2M385 716 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 GOLGA7Q7Z5G4 137 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 GPR180Q86V85 440 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 ZFP62Q8NB50 900 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-211ENST00000471260 PSD4Q8NDX1 1056 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 NUBPLQ8TB37 319 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 WDR20Q8TBZ3 569 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 SLC2A12Q8TD20 617 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 SGCZQ96LD1 299 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 DGAT2Q96PD7 388 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 MTERF1Q99551 399 aaKnown RBP12.53□□□□□ -0.4
HMGN1-211ENST00000471260 PELOQ9BRX2 385 aaKnown RBP12.53□□□□□ -0.4
HMGN1-211ENST00000471260 NTMT1Q9BV86 223 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 DDX31Q9H8H2 851 aaKnown RBP12.53□□□□□ -0.4
HMGN1-211ENST00000471260 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMGN1-211ENST00000471260 LYARQ9NX58 379 aaKnown RBP12.53□□□□□ -0.4
HMGN1-211ENST00000471260 MCM8Q9UJA3 840 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 ERVK-11Q9UQG0 969 aa12.53□□□□□ -0.4
HMGN1-211ENST00000471260 UTP20O75691 2785 aaKnown RBP12.53□□□□□ -0.4
HMGN1-211ENST00000471260 SAP18O00422 153 aaKnown RBP12.52□□□□□ -0.41
HMGN1-211ENST00000471260 PRRG2O14669 202 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 TFECO14948 347 aaPredicted RBP12.52□□□□□ -0.41
HMGN1-211ENST00000471260 PROM1O43490 865 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 SPAG7O75391 227 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 GALNSP34059 522 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 HK2P52789 917 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 RPS13P62277 151 aaKnown RBP12.52□□□□□ -0.41
HMGN1-211ENST00000471260 PLIN5Q00G26 463 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 TNFRSF17Q02223 184 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 CPSF6Q16630 551 aaKnown RBP eCLIP12.52□□□□□ -0.41
HMGN1-211ENST00000471260 RNFT1Q5M7Z0 435 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 MRM1Q6IN84 353 aaKnown RBP12.52□□□□□ -0.41
HMGN1-211ENST00000471260 OPN5Q6U736 354 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 MDGA2Q7Z553 956 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 TICAM1Q8IUC6 712 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 C4orf33Q8N1A6 199 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 PLD6Q8N2A8 252 aaKnown RBP12.52□□□□□ -0.41
HMGN1-211ENST00000471260 GOLM1Q8NBJ4 401 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 ZNF721Q8TF20 911 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 PHF10Q8WUB8 498 aaKnown RBP12.52□□□□□ -0.41
HMGN1-211ENST00000471260 ZNF75CPQ92670 426 aaPredicted RBP12.52□□□□□ -0.41
HMGN1-211ENST00000471260 ATP6V1E2Q96A05 226 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 ERP27Q96DN0 273 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 RASL10BQ96S79 203 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 MRPL57Q9BQC6 102 aaKnown RBP12.52□□□□□ -0.41
HMGN1-211ENST00000471260 SIKE1Q9BRV8 207 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 OR8D2Q9GZM6 311 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 TSPAN10Q9H1Z9 355 aaPredicted RBP12.52□□□□□ -0.41
HMGN1-211ENST00000471260 NOL11Q9H8H0 719 aaKnown RBP12.52□□□□□ -0.41
HMGN1-211ENST00000471260 CPSF2Q9P2I0 782 aaKnown RBP12.52□□□□□ -0.41
HMGN1-211ENST00000471260 BAIAP2L1Q9UHR4 511 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 SH3BGRL2Q9UJC5 107 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 TINAGQ9UJW2 476 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 MEMO1Q9Y316 297 aa12.52□□□□□ -0.41
HMGN1-211ENST00000471260 A0A0A6YYD5 115 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 E9PLN8 166 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 WWP2O00308 870 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 FGF17O60258 216 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 SMIM24O75264 130 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 SH3BGRLO75368 114 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 SEMA3DO95025 777 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 SIX3O95343 332 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-211ENST00000471260 ETHE1O95571 254 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 IGKV3-11P04433 115 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms