RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 ACP5P13686 325 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 ACTA2P62736 377 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 ACTG2P63267 376 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 SLC3A1Q07837 685 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 MADCAM1Q13477 382 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 SWI5Q1ZZU3 235 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 C18orf21Q32NC0 220 aaPredicted RBP10.05□□□□□ -0.8
RRP1B-202ENST00000470886 SNAP47Q5SQN1 464 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 ZNF550Q7Z398 422 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 ATCAYQ86WG3 371 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 FAM129CQ86XR2 697 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 NAGSQ8N159 534 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 SDR16C5Q8N3Y7 309 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 ZCCHC10Q8TBK6 192 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 FANK1Q8TC84 345 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 HAVCR2Q8TDQ0 301 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 TBX5Q99593 518 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 TRMT61BQ9BVS5 477 aaKnown RBP10.05□□□□□ -0.8
RRP1B-202ENST00000470886 BOCQ9BWV1 1114 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.05□□□□□ -0.8
RRP1B-202ENST00000470886 MEMO1Q9Y316 297 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 FAM25EA8MYX2 175 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 M0R233 179 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 B4GAT1O43505 415 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 MTRF1O75570 445 aaKnown RBP10.05□□□□□ -0.8
RRP1B-202ENST00000470886 ALPPL2P10696 532 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 NDUFV2P19404 249 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 RAB2AP61019 212 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 RAB40BQ12829 278 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 SLC22A10Q63ZE4 541 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 DESI1Q6ICB0 168 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 METAP1DQ6UB28 335 aaPredicted RBP10.05□□□□□ -0.8
RRP1B-202ENST00000470886 DLK2Q6UY11 383 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 SAMD12Q8N8I0 201 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 C7orf57Q8NEG2 295 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 PROKR2Q8NFJ6 384 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 OR7G3Q8NG95 312 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 OR6K6Q8NGW6 343 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 TMEM19Q96HH6 336 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 RIPOR3Q96MK2 946 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 SECISBP2Q96T21 854 aaKnown RBP10.05□□□□□ -0.8
RRP1B-202ENST00000470886 UNC119BA6NIH7 251 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 MEIS3P2A8K0S8 358 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 UBFD1O14562 309 aaKnown RBP10.05□□□□□ -0.8
RRP1B-202ENST00000470886 LEFTY1O75610 366 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 GBAP04062 536 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 S100GP29377 79 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 CDKN1CP49918 316 aaPredicted RBP10.05□□□□□ -0.8
RRP1B-202ENST00000470886 HK3P52790 923 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 WDR45BQ5MNZ6 344 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 DHRS4L2Q6PKH6 230 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 CPXM2Q8N436 756 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 DNAJA4Q8WW22 397 aaPredicted RBP10.05□□□□□ -0.8
RRP1B-202ENST00000470886 SGCDQ92629 289 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 SYT17Q9BSW7 474 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 MRI1Q9BV20 369 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 ZNF304Q9HCX3 659 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 COL4A5P29400 1685 aa10.05□□□□□ -0.8
RRP1B-202ENST00000470886 SCN4AP35499 1836 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 MYO18AQ92614 2054 aaKnown RBP10.04□□□□□ -0.8
RRP1B-202ENST00000470886 PCDH17O14917 1159 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 PPM1BO75688 479 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 GIMD1P0DJR0 217 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 BMP1P13497 986 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 ZNF823P16415 610 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 IGFALSP35858 605 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 ETV3P41162 512 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 TEKQ02763 1124 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 OTUD1Q5VV17 481 aaPredicted RBP10.04□□□□□ -0.8
RRP1B-202ENST00000470886 LRRN1Q6UXK5 716 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 ZNF782Q6ZMW2 699 aaPredicted RBP10.04□□□□□ -0.8
RRP1B-202ENST00000470886 C3orf58Q8NDZ4 430 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 OR4K5Q8NGD3 323 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 SCAMP4Q969E2 229 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 MS4A4AQ96JQ5 239 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 C7orf50Q9BRJ6 194 aaKnown RBP10.04□□□□□ -0.8
RRP1B-202ENST00000470886 GON7Q9BXV9 100 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 KATNBL1Q9H079 304 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 MVB12BQ9H7P6 319 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 NT5DC2Q9H857 520 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 PTTG3PQ9NZH4 202 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 A0A1B0GVI7 797 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 BTN3A2P78410 334 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 MLLT11Q13015 90 aaPredicted RBP10.04□□□□□ -0.8
RRP1B-202ENST00000470886 RAB33AQ14088 237 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 SELPLGQ14242 412 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 SF3A2Q15428 464 aaKnown RBP10.04□□□□□ -0.8
RRP1B-202ENST00000470886 DNM1P34Q6PK57 102 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 Q6ZSR9 355 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 SPAG16Q8N0X2 631 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 HDDC3Q8N4P3 179 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 OR4K14Q8NGD5 310 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 SHKBP1Q8TBC3 707 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 CD99L2Q8TCZ2 262 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 HRASLS5Q96KN8 279 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 OR4K3Q96R72 315 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 Q9N2J8 555 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 SPHK2Q9NRA0 654 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 PCDHGB2Q9Y5G2 931 aa10.04□□□□□ -0.8
RRP1B-202ENST00000470886 SIP14410 1827 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms