RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 HNF4AP41235 474 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 NR4A2P43354 598 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 STARP49675 285 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 PDLIM4P50479 330 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 STX4Q12846 297 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 NTRK2Q16620 822 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 ZNF595Q8IYB9 648 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 CCDC116Q8IYX3 515 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 OR1J4Q8NGS1 313 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 OR14L1PQ8NHC6 308 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 NT5CQ8TCD5 201 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 HPS1Q92902 700 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 ZNF775Q96BV0 537 aaPredicted RBP10.46□□□□□ -0.73
VPS26A-204ENST00000467852 ERGIC2Q96RQ1 377 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 HEY2Q9UBP5 337 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 ING1Q9UK53 422 aaPredicted RBP10.46□□□□□ -0.73
VPS26A-204ENST00000467852 GPR52Q9Y2T5 361 aa10.46□□□□□ -0.73
VPS26A-204ENST00000467852 PLCE1Q9P212 2302 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 MYOCOSA0A1B0GUC4 107 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 VWC2LB2RUY7 222 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 NDUFS8O00217 210 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 ALDOAP04075 364 aaKnown RBP10.45□□□□□ -0.74
VPS26A-204ENST00000467852 TTPAP49638 278 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 KLHL38Q2WGJ6 581 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 BICRALQ6AI39 1079 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 TIGD3Q6B0B8 471 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 AAGABQ6PD74 315 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 GPATCH11Q8N954 259 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 ZNF721Q8TF20 911 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 KCTD4Q8WVF5 259 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 TMEM41AQ96HV5 264 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 CBLN4Q9NTU7 201 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 CTTNBP2NLQ9P2B4 639 aa10.45□□□□□ -0.74
VPS26A-204ENST00000467852 EPPK1P58107 5090 aaKnown RBP10.45□□□□□ -0.74
VPS26A-204ENST00000467852 IGHV4-61A0A0C4DH41 118 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 ESYT3A0FGR9 886 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 SHOX2O60902 331 aaPredicted RBP10.44□□□□□ -0.74
VPS26A-204ENST00000467852 CTNSO60931 367 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 SKILP12757 684 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 CDH1P12830 882 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 ZNF23P17027 643 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 RBL1P28749 1068 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 KCNC1P48547 511 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 LHX2P50458 406 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 EFNA4P52798 201 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 ARFIP2P53365 341 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 RAB38P57729 211 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 C21orf58P58505 322 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 TBPL1P62380 186 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 RPP38P78345 283 aaKnown RBP10.44□□□□□ -0.74
VPS26A-204ENST00000467852 SEMA3AQ14563 771 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 IFNEQ86WN2 208 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 LRRC6Q86X45 466 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 CCDC50Q8IVM0 306 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 OR13J1Q8NGT2 312 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 PYCR2Q96C36 320 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 FAR2Q96K12 515 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 TEX10Q9NXF1 929 aaPredicted RBP10.44□□□□□ -0.74
VPS26A-204ENST00000467852 WWOXQ9NZC7 414 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 AMFRQ9UKV5 643 aa10.44□□□□□ -0.74
VPS26A-204ENST00000467852 FAM187AA6NFU0 413 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 LGALS16A8MUM7 142 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 H7C0C1 242 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 ZBTB14O43829 449 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 CDH16O75309 829 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 ETHE1O95571 254 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 SMIM10L1P0DMW3 83 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 HKR1P10072 659 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 ZNF708P17019 499 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 IMPA1P29218 277 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 DEKP35659 375 aaKnown RBP10.43□□□□□ -0.74
VPS26A-204ENST00000467852 ATP5OP48047 213 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 HNRNPFP52597 415 aaKnown RBP10.43□□□□□ -0.74
VPS26A-204ENST00000467852 CDH11P55287 796 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 CLDN18P56856 261 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 PRAMEP78395 509 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 BSPH1Q075Z2 132 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 GBX1Q14549 363 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 RPS6KA2Q15349 733 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 DPCR1Q3MIW9 517 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 MFSD7Q6UXD7 560 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 ZNF534Q76KX8 674 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 STRA8Q7Z7C7 330 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 C9orf40Q8IXQ3 194 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 TAGAPQ8N103 731 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 LINC01356Q8N9X3 169 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 FAM47BQ8NA70 645 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 TMEM52Q8NDY8 209 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 SPPL2AQ8TCT8 520 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 HAUS1Q96CS2 278 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 ITPKCQ96DU7 683 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 SMIM10Q96HG1 83 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 GAL3ST4Q96RP7 486 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 SOX7Q9BT81 388 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 NPLQ9BXD5 320 aaPredicted RBP10.43□□□□□ -0.74
VPS26A-204ENST00000467852 P2RY12Q9H244 342 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 PLSCR4Q9NRQ2 329 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 WHRNQ9P202 907 aa10.43□□□□□ -0.74
VPS26A-204ENST00000467852 ZFP69BQ9UJL9 534 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms