RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 RNH1P13489 461 aaKnown RBP6.46□□□□□ -1.38
SCAF4-204ENST00000467731 COX7A2P14406 83 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 ADSLP30566 484 aaPredicted RBP6.46□□□□□ -1.38
SCAF4-204ENST00000467731 HPCAL1P37235 193 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 PLA2G5P39877 138 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 POLR2JP52435 117 aaKnown RBP6.46□□□□□ -1.38
SCAF4-204ENST00000467731 C21orf58P58505 322 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 DCDP81605 110 aaKnown RBP6.46□□□□□ -1.38
SCAF4-204ENST00000467731 PDE7AQ13946 482 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 NKAIN1Q4KMZ8 207 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 ZNF385BQ569K4 471 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 VWA2Q5GFL6 755 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 LCN10Q6JVE6 187 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 FAM199XQ6PEV8 388 aaPredicted RBP6.46□□□□□ -1.38
SCAF4-204ENST00000467731 BLOC1S3Q6QNY0 202 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 COX15Q7KZN9 410 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 POU5F2Q8N7G0 328 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 GLB1L3Q8NCI6 653 aaPredicted RBP6.46□□□□□ -1.38
SCAF4-204ENST00000467731 TMEM52Q8NDY8 209 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 VPS33AQ96AX1 596 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 FAIM2Q9BWQ8 316 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 RPF2Q9H7B2 306 aaKnown RBP6.46□□□□□ -1.38
SCAF4-204ENST00000467731 POLR1BQ9H9Y6 1135 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 CTSFQ9UBX1 484 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 WBP11Q9Y2W2 641 aaKnown RBP6.46□□□□□ -1.38
SCAF4-204ENST00000467731 PCDHGA3Q9Y5H0 932 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 SPACA6W5XKT8 324 aa6.46□□□□□ -1.38
SCAF4-204ENST00000467731 FAM234BA2RU67 622 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 OR2W5A6NFC9 320 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 FBP2O00757 339 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 SLC22A2O15244 555 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 TMCC2O75069 709 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 LDB3O75112 727 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 PDE5AO76074 875 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 PGRP06401 933 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 KLK3P07288 261 aaPredicted RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 LAMP1P11279 417 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 DRD2P14416 443 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 PCSK2P16519 638 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 CAPN3P20807 821 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 TLX1P31314 330 aaPredicted RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 CENPAP49450 140 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 DGKQP52824 942 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 MRPL28Q13084 256 aaKnown RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 PRSS53Q2L4Q9 553 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 PGS1Q32NB8 556 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 VPS26BQ4G0F5 336 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 TIGD2Q4W5G0 525 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 ALKBH2Q6NS38 261 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 SLC48A1Q6P1K1 146 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 R3HCC1LQ7Z5L2 792 aaKnown RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 OR7G1Q8NGA0 311 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 DNAJB14Q8TBM8 379 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 TBC1D20Q96BZ9 403 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 LRFN5Q96NI6 719 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 SLC46A1Q96NT5 459 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 ZBTB18Q99592 522 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 WDR41Q9HAD4 459 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 UTS2RQ9UKP6 389 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 CES1P1Q9UKY3 287 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 PCDHA9Q9Y5H5 950 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 A0A1W2PS29 197 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 B4GALT2O60909 372 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 ERAL1O75616 437 aaKnown RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 TSPAN9O75954 239 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 BMP10O95393 424 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 FHP07954 510 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 RPL3P39023 403 aaKnown RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 KIR3DL1P43629 444 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 KCNK10P57789 538 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 FOXL2P58012 376 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 PHC1P78364 1004 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 MPEG1Q2M385 716 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 DPY19L1Q2PZI1 675 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 CPTPQ5TA50 214 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 FAM91A1Q658Y4 838 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 OR4F3Q6IEY1 312 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 ZNF517Q6ZMY9 492 aaPredicted RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 TIPARPQ7Z3E1 657 aaKnown RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 SNX32Q86XE0 403 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 LSMEM1Q8N8F7 131 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 OR8J2Q8NGG1 315 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 FNDC8Q8TC99 324 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 DNAJC9Q8WXX5 260 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 CIDECQ96AQ7 238 aaPredicted RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 EXOSC8Q96B26 276 aaKnown RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 PPCDCQ96CD2 204 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 MTERF3Q96E29 417 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 SLC52A3Q9NQ40 469 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 EHD3Q9NZN3 535 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 IFT80Q9P2H3 777 aaPredicted RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 ZNF282Q9UDV7 671 aaPredicted RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 ATP6V1HQ9UI12 483 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 MAPRE3Q9UPY8 281 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 LRCH1Q9Y2L9 728 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 CCDC154A6NI56 674 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 NVLO15381 856 aaKnown RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 UBOX5O94941 541 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 CBX6O95503 412 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 DLGAP3O95886 979 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms