RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 CALML3P27482 149 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 RASGEF1BQ0VAM2 473 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 TRA2AQ13595 282 aaKnown RBP eCLIP2.75□□□□□ -1.97
XRN1-206ENST00000467077 HYAL4Q2M3T9 481 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 SPECC1Q5M775 1068 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 FAM47EQ6ZV65 393 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 CHMP1BQ7LBR1 199 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 ZFAND4Q86XD8 727 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 VSIG1Q86XK7 387 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 MFN1Q8IWA4 741 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 MAML2Q8IZL2 1156 aaPredicted RBP2.75□□□□□ -1.97
XRN1-206ENST00000467077 ZNF444Q8N0Y2 327 aaPredicted RBP2.75□□□□□ -1.97
XRN1-206ENST00000467077 TMEM105Q8N8V8 129 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 KIF18AQ8NI77 898 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 C9orf43Q8TAL5 461 aaPredicted RBP2.75□□□□□ -1.97
XRN1-206ENST00000467077 CHURC1Q8WUH1 139 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 KCNE4Q8WWG9 221 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 METTL21AQ8WXB1 218 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 PROX1Q92786 737 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 LRRC3BQ96PB8 259 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 LGMNQ99538 433 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 MFSD1Q9H3U5 465 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 MTHFD2LQ9H903 347 aaPredicted RBP2.75□□□□□ -1.97
XRN1-206ENST00000467077 GNB4Q9HAV0 340 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 TNFRSF19Q9NS68 423 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 TBC1D7Q9P0N9 293 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 CTSZQ9UBR2 303 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 PRDM4Q9UKN5 801 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 ELF5Q9UKW6 265 aaPredicted RBP2.75□□□□□ -1.97
XRN1-206ENST00000467077 CCPG1Q9ULG6 757 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 BARX2Q9UMQ3 279 aaPredicted RBP2.75□□□□□ -1.97
XRN1-206ENST00000467077 LIPGQ9Y5X9 500 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 SELENOKQ9Y6D0 94 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 LAMA1P25391 3075 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 MIA3Q5JRA6 1907 aa2.75□□□□□ -1.97
XRN1-206ENST00000467077 C2orf16Q68DN1 1984 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 PIEZO1Q92508 2521 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 SPEGQ15772 3267 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 DENND4AQ7Z401 1863 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 TRAV24A0A0B4J272 114 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 TRBV4-1A0A0J9YWV2 114 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 C5orf67F2Z3F1 127 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 AP5Z1O43299 807 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 EIF5BO60841 1220 aaKnown RBP2.74□□□□□ -1.97
XRN1-206ENST00000467077 TBCAO75347 108 aaKnown RBP2.74□□□□□ -1.97
XRN1-206ENST00000467077 RPS6KA5O75582 802 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 GSRP00390 522 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 PENKP01210 267 aaPredicted RBP2.74□□□□□ -1.97
XRN1-206ENST00000467077 MMP1P03956 469 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 ZNF286BP0CG31 522 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 FDPSP14324 419 aaKnown RBP2.74□□□□□ -1.97
XRN1-206ENST00000467077 CASTP20810 708 aaKnown RBP2.74□□□□□ -1.97
XRN1-206ENST00000467077 EEF1B2P24534 225 aaKnown RBP2.74□□□□□ -1.97
XRN1-206ENST00000467077 DNAJB1P25685 340 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 HSPA4P34932 840 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 SLC1A4P43007 532 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 DCDC1P59894 354 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 SRSF9Q13242 221 aaKnown RBP eCLIP2.74□□□□□ -1.97
XRN1-206ENST00000467077 ZNF273Q14593 569 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 OPCMLQ14982 345 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 EIPR1Q53HC9 387 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 CTR9Q6PD62 1173 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 LCLAT1Q6UWP7 414 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 PPP1R21Q6ZMI0 780 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 SLC24A5Q71RS6 500 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 ERN2Q76MJ5 926 aaKnown RBP2.74□□□□□ -1.97
XRN1-206ENST00000467077 ADGRD2Q7Z7M1 963 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 SLC25A42Q86VD7 318 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 ABHD12Q8N2K0 398 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 GMCL1P1Q8NEA9 526 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 KLHL30-AS1Q8NEE0 82 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 TYMSOSQ8TAI1 123 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 CHPT1Q8WUD6 406 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 ROBO4Q8WZ75 1007 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 SEPT8Q92599 483 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 FRAT1Q92837 279 aaPredicted RBP2.74□□□□□ -1.97
XRN1-206ENST00000467077 TOP1MTQ969P6 601 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 SPSB1Q96BD6 273 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 KLHL5Q96PQ7 755 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 CDCA3Q99618 268 aaPredicted RBP2.74□□□□□ -1.97
XRN1-206ENST00000467077 EDEM3Q9BZQ6 932 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 EGLN3Q9H6Z9 239 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 DNAJC4Q9NNZ3 241 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 TXNDC16Q9P2K2 825 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 ANAPC5Q9UJX4 755 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 ZNF510Q9Y2H8 683 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 PATJQ8NI35 1801 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 CACNA1AO00555 2505 aa2.74□□□□□ -1.97
XRN1-206ENST00000467077 ZFHX2Q9C0A1 2572 aaPredicted RBP2.73□□□□□ -1.97
XRN1-206ENST00000467077 SPTBN4Q9H254 2564 aa2.73□□□□□ -1.97
XRN1-206ENST00000467077 ADGRA3Q8IWK6 1321 aa2.73□□□□□ -1.97
XRN1-206ENST00000467077 RALGAPA1Q6GYQ0 2036 aa2.73□□□□□ -1.97
XRN1-206ENST00000467077 SHISA7A6NL88 538 aa2.73□□□□□ -1.97
XRN1-206ENST00000467077 A8MXK9 166 aa2.73□□□□□ -1.97
XRN1-206ENST00000467077 NPIPB9F8W1W9 429 aa2.73□□□□□ -1.97
XRN1-206ENST00000467077 G3V2L1 256 aa2.73□□□□□ -1.97
XRN1-206ENST00000467077 H0Y9J4 135 aa2.73□□□□□ -1.97
XRN1-206ENST00000467077 K7EQD1 137 aa2.73□□□□□ -1.97
XRN1-206ENST00000467077 PRDM1O75626 825 aa2.73□□□□□ -1.97
XRN1-206ENST00000467077 GH1P01241 217 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms