RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 NT5CQ8TCD5 201 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 PYCR2Q96C36 320 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 PCBD2Q9H0N5 130 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 WHRNQ9P202 907 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 AMFRQ9UKV5 643 aa11.28□□□□□ -0.6
UBR4-210ENST00000466969 PABPN1LA6NDY0 278 aaKnown RBP11.27□□□□□ -0.61
UBR4-210ENST00000466969 CCT8L1PA6NM43 557 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 RAMP1O60894 148 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 ESR1P03372 595 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 PECAM1P16284 738 aaPredicted RBP11.27□□□□□ -0.61
UBR4-210ENST00000466969 ZNF708P17019 499 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 TPSB2P20231 275 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 PSMB1P20618 241 aaKnown RBP11.27□□□□□ -0.61
UBR4-210ENST00000466969 ATP5DP30049 168 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 HNRNPFP52597 415 aaKnown RBP11.27□□□□□ -0.61
UBR4-210ENST00000466969 DVL1P1P54792 670 aaPredicted RBP11.27□□□□□ -0.61
UBR4-210ENST00000466969 CLDN18P56856 261 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 KIF5AQ12840 1032 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 KRT31Q15323 416 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 TPSAB1Q15661 275 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 CTU2Q2VPK5 515 aaKnown RBP11.27□□□□□ -0.61
UBR4-210ENST00000466969 AARS2Q5JTZ9 985 aaKnown RBP11.27□□□□□ -0.61
UBR4-210ENST00000466969 THSD4Q6ZMP0 1018 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 Q6ZPA2 131 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 BEND4Q6ZU67 534 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 C9orf40Q8IXQ3 194 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 MUC15Q8N387 334 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 FAM47BQ8NA70 645 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 TMEM52Q8NDY8 209 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 OR4L1Q8NH43 312 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 RDH11Q8TC12 318 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 ZNF721Q8TF20 911 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 FIG4Q92562 907 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 P3H4Q92791 437 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 S100PBPQ96BU1 408 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 FOXN4Q96NZ1 517 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 PPP1R2P1Q96PQ5 205 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 GAL3ST4Q96RP7 486 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 CCT8L2Q96SF2 557 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 RNF122Q9H9V4 155 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 PLSCR4Q9NRQ2 329 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 DDX28Q9NUL7 540 aaKnown RBP11.27□□□□□ -0.61
UBR4-210ENST00000466969 WWOXQ9NZC7 414 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 EMC9Q9Y3B6 208 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 FKBP7Q9Y680 259 aa11.27□□□□□ -0.61
UBR4-210ENST00000466969 LOC390937A0A1W2PQ73 354 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 LRP5LA4QPB2 252 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 MROH6A6NGR9 719 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 CDH16O75309 829 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 CDH1P12830 882 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 EPHA1P21709 976 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 PSMA3P25788 255 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 CTNNA2P26232 953 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 APEX1P27695 318 aaKnown RBP11.26□□□□□ -0.61
UBR4-210ENST00000466969 ADH6P28332 368 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 GFRA1P56159 465 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 RAB38P57729 211 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 TBPL1P62380 186 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 IRF9Q00978 393 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 GPS1Q13098 491 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 TFDP2Q14188 446 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 KLHL38Q2WGJ6 581 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 UGT2A3Q6UWM9 527 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 ANGPTL8Q6UXH0 198 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 ATG4DQ86TL0 474 aaPredicted RBP11.26□□□□□ -0.61
UBR4-210ENST00000466969 TAGAPQ8N103 731 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 GPATCH11Q8N954 259 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 SPPL2AQ8TCT8 520 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 FAR2Q96K12 515 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 QKIQ96PU8 341 aaKnown RBP eCLIP11.26□□□□□ -0.61
UBR4-210ENST00000466969 RASSF4Q9H2L5 321 aa11.26□□□□□ -0.61
UBR4-210ENST00000466969 CDC42EP4Q9H3Q1 356 aaKnown RBP11.26□□□□□ -0.61
UBR4-210ENST00000466969 DPRXA6NFQ7 191 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 HACD1B0YJ81 288 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 SHISA9B4DS77 424 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 DYRK3O43781 588 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 CTNSO60931 367 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 ETHE1O95571 254 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 KRT1P04264 644 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 COX7A2P14406 83 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 IMPA1P29218 277 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 GCH1P30793 250 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 CASP3P42574 277 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 TTPAP49638 278 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 FBXW4P57775 412 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 UBA52P62987 128 aaKnown RBP11.25□□□□□ -0.61
UBR4-210ENST00000466969 BTN3A2P78410 334 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 IL13RA1P78552 427 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 SERTAD2Q14140 314 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 SEMA3AQ14563 771 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 NFKBIBQ15653 356 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 SLC29A4Q7RTT9 530 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 STK32CQ86UX6 486 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 GALNT12Q8IXK2 581 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 UBQLNLQ8IYU4 475 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 ZNF619Q8N2I2 560 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 OR6K3Q8NGY3 331 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 HSD17B8Q92506 261 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 HPS1Q92902 700 aa11.25□□□□□ -0.61
UBR4-210ENST00000466969 UBE2FQ969M7 185 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms