RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 RBM18Q96H35 190 aaKnown RBP14.21□□□□□ -0.13
NPHP4-205ENST00000466897 DGAT2Q96PD7 388 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 LPAR4Q99677 370 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 WDR77Q9BQA1 342 aaPredicted RBP14.21□□□□□ -0.13
NPHP4-205ENST00000466897 TUBB6Q9BUF5 446 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 SAR1AQ9NR31 198 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 FAM120CQ9NX05 1096 aaKnown RBP14.21□□□□□ -0.13
NPHP4-205ENST00000466897 SH3BP4Q9P0V3 963 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 RAXQ9Y2V3 346 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 RNASET2O00584 256 aaKnown RBP14.2□□□□□ -0.14
NPHP4-205ENST00000466897 PEX12O00623 359 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 OR10H2O60403 315 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 HPP00738 406 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 PGRP06401 933 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 LAMP1P11279 417 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 ID2Q02363 134 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 PRSS53Q2L4Q9 553 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 SFT2D3Q587I9 215 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 FAAH2Q6GMR7 532 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 CCDC81Q6ZN84 652 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 NDUFAF7Q7L592 441 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 ZFP28Q8NHY6 868 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 PSMA8Q8TAA3 256 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 SNRNP27Q8WVK2 155 aaKnown RBP14.2□□□□□ -0.14
NPHP4-205ENST00000466897 DAZLQ92904 295 aaKnown RBP14.2□□□□□ -0.14
NPHP4-205ENST00000466897 AMDHD1Q96NU7 426 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 BBS4Q96RK4 519 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 DUSP26Q9BV47 211 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 SLAMF7Q9NQ25 335 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 P4HTMQ9NXG6 502 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 CELSR3Q9NYQ7 3312 aa14.2□□□□□ -0.14
NPHP4-205ENST00000466897 ZFHX4Q86UP3 3567 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 A0A1W2PS29 197 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 K7ENP7 123 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 DYRK3O43781 588 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 SCN2BO60939 215 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 IFNA16P05015 189 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 S100A3P33764 101 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 FEN1P39748 380 aaKnown RBP14.19□□□□□ -0.14
NPHP4-205ENST00000466897 POLR2JP52435 117 aaKnown RBP14.19□□□□□ -0.14
NPHP4-205ENST00000466897 NME5P56597 212 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 WNT3P56703 355 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 TMPRSS3P57727 454 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 AP2B1P63010 937 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 DUSP2Q05923 314 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 MAP4K2Q12851 820 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 SF3A3Q12874 501 aaKnown RBP eCLIP14.19□□□□□ -0.147e-8■■□□□ 13.8
NPHP4-205ENST00000466897 EXT1Q16394 746 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 PRICKLE4Q2TBC4 344 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 FAM174BQ3ZCQ3 159 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 SPANXN4Q5MJ08 99 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 ANXA8L1Q5VT79 327 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 PLAG1Q6DJT9 500 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 ANKRD26P1Q6NSI1 321 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 INO80CQ6PI98 192 aaPredicted RBP14.19□□□□□ -0.14
NPHP4-205ENST00000466897 PAPD4Q6PIY7 484 aaKnown RBP14.19□□□□□ -0.14
NPHP4-205ENST00000466897 PAOXQ6QHF9 649 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 BLOC1S3Q6QNY0 202 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 FUNDC1Q8IVP5 155 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 MORN4Q8NDC4 146 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 VPS37AQ8NEZ2 397 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 OR9I1Q8NGQ6 314 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 BCAS4Q8TDM0 211 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 PTPMT1Q8WUK0 201 aaPredicted RBP14.19□□□□□ -0.14
NPHP4-205ENST00000466897 RIT1Q92963 219 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 CTHRC1Q96CG8 243 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 FBXL20Q96IG2 436 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 ART5Q96L15 291 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 IMMP1LQ96LU5 166 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 FER1L6-AS2Q96M78 137 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 DCBLD2Q96PD2 775 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 NMUR2Q9GZQ4 415 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 GLIPR2Q9H4G4 154 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 CXorf21Q9HAI6 301 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 NEUROD4Q9HD90 331 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 G3BP2Q9UN86 482 aaKnown RBP14.19□□□□□ -0.14
NPHP4-205ENST00000466897 POLHQ9Y253 713 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 CLCA3PQ9Y6N3 262 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 ACACBO00763 2458 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 IGF2RP11717 2491 aa14.19□□□□□ -0.14
NPHP4-205ENST00000466897 CPAMD8Q8IZJ3 1885 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 NUP214P35658 2090 aaPredicted RBP14.18□□□□□ -0.14
NPHP4-205ENST00000466897 DOCK10Q96BY6 2186 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 NSG1A0A0A6YYJ2 146 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 PRSS51A0A1B0GVH4 220 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 C17orf105B2RV13 164 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 PLOD2O00469 737 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 NDUFAB1O14561 156 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 NKX2-8O15522 239 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 DCTN3O75935 186 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 ICAM2P13598 275 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 NCBP2P52298 156 aaKnown RBP eCLIP14.18□□□□□ -0.14
NPHP4-205ENST00000466897 RRADP55042 308 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 KCNK10P57789 538 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 SLC26A5P58743 744 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 EEF1A2Q05639 463 aaKnown RBP14.18□□□□□ -0.14
NPHP4-205ENST00000466897 ATP1A4Q13733 1029 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 ZNF750Q32MQ0 723 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 PGS1Q32NB8 556 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 ZNF628Q5EBL2 1059 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms