RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 LRRC20Q8TCA0 184 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 TM9SF4Q92544 642 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 OMA1Q96E52 524 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 PDXPQ96GD0 296 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 BRD9Q9H8M2 597 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 FGF20Q9NP95 211 aaPredicted RBP18.75■□□□□ 0.59
SDF4-205ENST00000465727 TAS2R7Q9NYW3 318 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 TVP23BQ9NYZ1 205 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 TRDV1A0A1B0GX56 115 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 QSOX1O00391 747 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 TLX2O43763 284 aaPredicted RBP18.75■□□□□ 0.59
SDF4-205ENST00000465727 SLC19A2O60779 497 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 P2RY14Q15391 338 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 ANKRD54Q6NXT1 300 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 TEX261Q6UWH6 196 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 CD300LDQ6UXZ3 194 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 SLC24A5Q71RS6 500 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 TRILQ7L0X0 811 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 WDR53Q7Z5U6 358 aaPredicted RBP18.75■□□□□ 0.59
SDF4-205ENST00000465727 FBXL6Q8N531 539 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 ASZ1Q8WWH4 475 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 GPR62Q9BZJ7 368 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 RANBP3Q9H6Z4 567 aaPredicted RBP18.75■□□□□ 0.59
SDF4-205ENST00000465727 GALNT9Q9HCQ5 603 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 MYNNQ9NPC7 610 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 U3KQ87 197 aa18.75■□□□□ 0.59
SDF4-205ENST00000465727 A8MX80 341 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 MEN1O00255 615 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 HPGDSO60760 199 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 LATS1O95835 1130 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 IGSF6O95976 241 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 IGFBP1P08833 259 aaPredicted RBP18.74■□□□□ 0.59
SDF4-205ENST00000465727 IRF1P10914 325 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 RPS13P62277 151 aaKnown RBP18.74■□□□□ 0.59
SDF4-205ENST00000465727 ADAM15Q13444 863 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 CDH18Q13634 790 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 AGTRAPQ6RW13 159 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 RSPO2Q6UXX9 243 aaPredicted RBP18.74■□□□□ 0.59
SDF4-205ENST00000465727 METTL3Q86U44 580 aaKnown RBP18.74■□□□□ 0.59
SDF4-205ENST00000465727 SYT14Q8NB59 555 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 OR4M2Q8NGB6 313 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 OR5AK3PQ8NH89 298 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 CIDECQ96AQ7 238 aaPredicted RBP18.74■□□□□ 0.59
SDF4-205ENST00000465727 SCRN2Q96FV2 425 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 ZNF582Q96NG8 517 aaPredicted RBP18.74■□□□□ 0.59
SDF4-205ENST00000465727 GFM1Q96RP9 751 aaKnown RBP18.74■□□□□ 0.59
SDF4-205ENST00000465727 ATF6BQ99941 703 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 RERGLQ9H628 205 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 PRM3Q9NNZ6 103 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 EXOSC1Q9Y3B2 195 aaKnown RBP18.74■□□□□ 0.59
SDF4-205ENST00000465727 CEP350Q5VT06 3117 aa18.74■□□□□ 0.59
SDF4-205ENST00000465727 ISM1B1AKI9 464 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 SMLR1H3BR10 107 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 H7C4K7 107 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 PRKYO43930 277 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 PSIP1O75475 530 aaKnown RBP18.73■□□□□ 0.59
SDF4-205ENST00000465727 ACP2P11117 423 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 ATP12AP54707 1039 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 FABP5Q01469 135 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 RGS1Q08116 209 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 FOXD4Q12950 439 aaPredicted RBP18.73■□□□□ 0.59
SDF4-205ENST00000465727 NAE1Q13564 534 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 DSG2Q14126 1118 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 FAM26DQ5JW98 314 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 TCTN3Q6NUS6 607 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 MED27Q6P2C8 311 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 USP45Q70EL2 814 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 BCDIN3DQ7Z5W3 292 aaKnown RBP18.73■□□□□ 0.59
SDF4-205ENST00000465727 CHFRQ96EP1 664 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 MED8Q96G25 268 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 LRR1Q96L50 414 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 OR4K3Q96R72 315 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 KLF16Q9BXK1 252 aaPredicted RBP18.73■□□□□ 0.59
SDF4-205ENST00000465727 STOX2Q9P2F5 926 aaPredicted RBP18.73■□□□□ 0.59
SDF4-205ENST00000465727 ACAD8Q9UKU7 415 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 YARS2Q9Y2Z4 477 aaKnown RBP18.73■□□□□ 0.59
SDF4-205ENST00000465727 HELZP42694 1942 aaKnown RBP18.73■□□□□ 0.59
SDF4-205ENST00000465727 LOC102723532A0A0G2JNH3 316 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 A0A1W2PRB8 838 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 ARHGEF33A8MVX0 844 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 C5orf58C9J3I9 102 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 FOXE1O00358 373 aaPredicted RBP18.73■□□□□ 0.59
SDF4-205ENST00000465727 CDK2AP1O14519 115 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 SGTAO43765 313 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 SLCO2B1O94956 709 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 SOD1P00441 154 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 POU3F3P20264 500 aaPredicted RBP18.73■□□□□ 0.59
SDF4-205ENST00000465727 UQCRC2P22695 453 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 SOAT1P35610 550 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 MPEG1Q2M385 716 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 ADNP2Q6IQ32 1131 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 SDE2Q6IQ49 451 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 TMEM107Q6UX40 140 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 COMMD6Q7Z4G1 85 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 GRAMD2AQ8IUY3 354 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 LINC00471Q8N535 108 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 SLC28A3Q9HAS3 691 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 A4GALTQ9NPC4 353 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 SEMA3GQ9NS98 782 aa18.73■□□□□ 0.59
SDF4-205ENST00000465727 TMEM161AQ9NX61 479 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms