RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 CPMP14384 443 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 PORP16435 677 aaPredicted RBP11.53□□□□□ -0.56
CHPF2-202ENST00000465601 TACR1P25103 407 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 ZNF267Q14586 743 aaPredicted RBP11.53□□□□□ -0.56
CHPF2-202ENST00000465601 HEPACAMQ14CZ8 416 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 MEP1AQ16819 746 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 PLEKHN1Q494U1 663 aaPredicted RBP11.53□□□□□ -0.56
CHPF2-202ENST00000465601 XKR7Q5GH72 579 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 ACER2Q5QJU3 275 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 ATG16L1Q676U5 607 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 FAM71E1Q6IPT2 247 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 RPS19BP1Q86WX3 136 aaKnown RBP11.53□□□□□ -0.56
CHPF2-202ENST00000465601 TRIM42Q8IWZ5 723 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 SLC5A8Q8N695 610 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 CATSPER1Q8NEC5 780 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 OR1N1Q8NGS0 311 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.53□□□□□ -0.56
CHPF2-202ENST00000465601 ZNF721Q8TF20 911 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 RIT1Q92963 219 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 EXOSC8Q96B26 276 aaKnown RBP11.53□□□□□ -0.56
CHPF2-202ENST00000465601 EGLN2Q96KS0 407 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 PPP3R2Q96LZ3 170 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 PELOQ9BRX2 385 aaKnown RBP11.53□□□□□ -0.56
CHPF2-202ENST00000465601 CNPPD1Q9BV87 410 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 ACBD3Q9H3P7 528 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 LIN28AQ9H9Z2 209 aaKnown RBP11.53□□□□□ -0.56
CHPF2-202ENST00000465601 THAP1Q9NVV9 213 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 BAIAP2L1Q9UHR4 511 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 TEKT2Q9UIF3 430 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 HAO1Q9UJM8 370 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 UTS2RQ9UKP6 389 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 HEMK1Q9Y5R4 338 aaPredicted RBP11.53□□□□□ -0.56
CHPF2-202ENST00000465601 NINQ8N4C6 2090 aa11.53□□□□□ -0.56
CHPF2-202ENST00000465601 DYTNA2CJ06 578 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 SUV39H1O43463 412 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 DYRK3O43781 588 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 SNNO75324 88 aaPredicted RBP11.52□□□□□ -0.57
CHPF2-202ENST00000465601 ZFAND5O76080 213 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 CSNK2A2P19784 350 aaPredicted RBP11.52□□□□□ -0.57
CHPF2-202ENST00000465601 NT5EP21589 574 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 GALNSP34059 522 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 PTGER1P34995 402 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 GSTM5P46439 218 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 ERVK-8P63133 956 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 PPP2R2AP63151 447 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 ARG2P78540 354 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 DUSP2Q05923 314 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 PRSS53Q2L4Q9 553 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 ATP6AP1LQ52LC2 224 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 C6orf136Q5SQH8 315 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 SLC6A19Q695T7 634 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 HSDL2Q6YN16 418 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 C16orf47Q6ZP98 133 aaPredicted RBP11.52□□□□□ -0.57
CHPF2-202ENST00000465601 TICAM1Q8IUC6 712 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 BEST3Q8N1M1 668 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF75CPQ92670 426 aaPredicted RBP11.52□□□□□ -0.57
CHPF2-202ENST00000465601 HAS2Q92819 552 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 GFM2Q969S9 779 aaKnown RBP11.52□□□□□ -0.57
CHPF2-202ENST00000465601 TUBGCP3Q96CW5 907 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 C19orf60Q96EN9 201 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 CNRIP1Q96F85 164 aaPredicted RBP11.52□□□□□ -0.57
CHPF2-202ENST00000465601 FCRL1Q96LA6 429 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF681Q96N22 645 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 TSSK3Q96PN8 268 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 CCT7Q99832 543 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 CXorf21Q9HAI6 301 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 MYNNQ9NPC7 610 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 PFDN4Q9NQP4 134 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 ANAPC2Q9UJX6 822 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 EXO1Q9UQ84 846 aaKnown RBP11.52□□□□□ -0.57
CHPF2-202ENST00000465601 ERVK-19Q9WJR5 959 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 WBP11Q9Y2W2 641 aaKnown RBP11.52□□□□□ -0.57
CHPF2-202ENST00000465601 TMED5Q9Y3A6 229 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF780BQ9Y6R6 833 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 MYO18BQ8IUG5 2567 aa11.52□□□□□ -0.57
CHPF2-202ENST00000465601 SHANK1Q9Y566 2161 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 GABRR3A8MPY1 467 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 AKAP10O43572 662 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 LRATO95237 230 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 CT62P0C5K7 136 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 KITP10721 976 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 BCKDHAP12694 445 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 SDC1P18827 310 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 DDCP20711 480 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 HK2P52789 917 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 MLF1P58340 268 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 OCRLQ01968 901 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 SPRED3Q2MJR0 410 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 FAM111BQ6SJ93 734 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 Q6ZS92 163 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 PRICKLE2Q7Z3G6 844 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 CCDC116Q8IYX3 515 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 ADCY4Q8NFM4 1077 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 CLHC1Q8NHS4 586 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 RAB3IL1Q8TBN0 382 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 PNPLA2Q96AD5 504 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 FBXL20Q96IG2 436 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 C1orf50Q9BV19 199 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 NUF2Q9BZD4 464 aa11.51□□□□□ -0.57
CHPF2-202ENST00000465601 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.51□□□□□ -0.57
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