RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 C5orf34Q96MH7 638 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 ZNF317Q96PQ6 595 aaPredicted RBP16.35■□□□□ 0.21
CPSF4-209ENST00000465132 MAPKAP1Q9BPZ7 522 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 CRB3Q9BUF7 120 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 SORBS1Q9BX66 1292 aaKnown RBP16.35■□□□□ 0.21
CPSF4-209ENST00000465132 RABEP2Q9H5N1 569 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 FBXL4Q9UKA2 621 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 NTNG1Q9Y2I2 539 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 POLR3HQ9Y535 204 aaPredicted RBP16.35■□□□□ 0.21
CPSF4-209ENST00000465132 PTGDR2Q9Y5Y4 395 aa16.35■□□□□ 0.21
CPSF4-209ENST00000465132 PRRC2CQ9Y520 2896 aaKnown RBP16.34■□□□□ 0.21
CPSF4-209ENST00000465132 A0A0G2JND7 137 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 UBDO15205 165 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 TMPRSS11DO60235 418 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 PRR35P0CG20 571 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 BCKDHAP12694 445 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 PRPS1L1P21108 318 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 ITGA3P26006 1051 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 PIK3R1P27986 724 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 DCTP40126 519 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 ARFIP2P53365 341 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 CLNS1AP54105 237 aaKnown RBP16.34■□□□□ 0.21
CPSF4-209ENST00000465132 AP2B1P63010 937 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 KLC1Q07866 573 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 ACTN3Q08043 901 aaPredicted RBP16.34■□□□□ 0.21
CPSF4-209ENST00000465132 ELOAQ14241 798 aaKnown RBP16.34■□□□□ 0.21
CPSF4-209ENST00000465132 NDUFAF5Q5TEU4 345 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 COX15Q7KZN9 410 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 PLPP5Q8NEB5 264 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 C16orf78Q8WTQ4 265 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 ZBTB18Q99592 522 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 EBPLQ9BY08 206 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 PRTFDC1Q9NRG1 225 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 ATAD3AQ9NVI7 634 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 CTSFQ9UBX1 484 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 C3orf18Q9UK00 162 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 ADAM21Q9UKJ8 722 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 DLGAP4Q9Y2H0 992 aa16.34■□□□□ 0.21
CPSF4-209ENST00000465132 IDSB3KWA1 339 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 CYR61O00622 381 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 ZNF195O14628 629 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 B4GALT2O60909 372 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 B3GALT4O96024 378 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 GBAP04062 536 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 JUNP05412 331 aaKnown RBP16.33■□□□□ 0.2
CPSF4-209ENST00000465132 COX7A2P14406 83 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 DDCP20711 480 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 IDH3AP50213 366 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 RAE1P78406 368 aaKnown RBP16.33■□□□□ 0.2
CPSF4-209ENST00000465132 C2orf80Q0P641 193 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 SYT16Q17RD7 645 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 DPY19L1Q2PZI1 675 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 VWA2Q5GFL6 755 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 LIX1Q8N485 282 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 FAM47BQ8NA70 645 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 OR4K14Q8NGD5 310 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 CDC26Q8NHZ8 85 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 TM4SF18Q96CE8 201 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 ZNF764Q96H86 408 aaPredicted RBP16.33■□□□□ 0.2
CPSF4-209ENST00000465132 PTCHD1Q96NR3 888 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 WDR77Q9BQA1 342 aaPredicted RBP16.33■□□□□ 0.2
CPSF4-209ENST00000465132 WDR55Q9H6Y2 383 aaPredicted RBP16.33■□□□□ 0.2
CPSF4-209ENST00000465132 TMEM45AQ9NWC5 275 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 DCTN4Q9UJW0 460 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 ATG4BQ9Y4P1 393 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 PCDHA9Q9Y5H5 950 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 CSAG2Q9Y5P2 127 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 ZNF780BQ9Y6R6 833 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 CCDC88CQ9P219 2028 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 MYO9AB2RTY4 2548 aa16.33■□□□□ 0.2
CPSF4-209ENST00000465132 A0A1W2PR48 441 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 SOCS6O14544 535 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 ALOX12BO75342 701 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 C8orf89P0DMQ9 161 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 SDC1P18827 310 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 ALDH9A1P49189 494 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 HNRNPH2P55795 449 aaKnown RBP16.32■□□□□ 0.2
CPSF4-209ENST00000465132 NSDHLQ15738 373 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 SLC9B1Q4ZJI4 515 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 C6orf163Q5TEZ5 329 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 GLB1L3Q8NCI6 653 aaPredicted RBP16.32■□□□□ 0.2
CPSF4-209ENST00000465132 ST6GALNAC3Q8NDV1 305 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 SPSB2Q99619 263 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 C1orf50Q9BV19 199 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 SOX17Q9H6I2 414 aaPredicted RBP16.32■□□□□ 0.2
CPSF4-209ENST00000465132 AGPAT4Q9NRZ5 378 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 ENTPD4Q9Y227 616 aa16.32■□□□□ 0.2
CPSF4-209ENST00000465132 TBX19O60806 448 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 GPR75O95800 540 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 AIFM1O95831 613 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 IL3P08700 152 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 GYS2P54840 703 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 LRRC74AQ0VAA2 488 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 LSM12Q3MHD2 195 aaKnown RBP16.31■□□□□ 0.2
CPSF4-209ENST00000465132 AGAP7PQ5VUJ5 663 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 SLC48A1Q6P1K1 146 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 KIRREL2Q6UWL6 708 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 IGFL2Q6UWQ7 119 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 SPATA21Q7Z572 469 aa16.31■□□□□ 0.2
CPSF4-209ENST00000465132 DTWD1Q8N5C7 304 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms