RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 FCRL1Q96LA6 429 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 NPAS2Q99743 824 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 CDCP1Q9H5V8 836 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 MYNNQ9NPC7 610 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 PNPOQ9NVS9 261 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 PLA2G3Q9NZ20 509 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 ANAPC2Q9UJX6 822 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 ZNF223Q9UK11 482 aaPredicted RBP13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 UTS2RQ9UKP6 389 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 HEMK1Q9Y5R4 338 aaPredicted RBP13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 CPAMD8Q8IZJ3 1885 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 A0A1W2PS29 197 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 KLF11O14901 512 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 SUV39H1O43463 412 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 ZFAND5O76080 213 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 WDPCPO95876 746 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 JUNP05412 331 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 DDCP20711 480 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 TACR1P25103 407 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 FEN1P39748 380 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 ARG2P78540 354 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 ZNF267Q14586 743 aaPredicted RBP13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 PDCD2Q16342 344 aaPredicted RBP13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 SPRED3Q2MJR0 410 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 ATP6AP1LQ52LC2 224 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 FAM71E1Q6IPT2 247 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 HSDL2Q6YN16 418 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 IKBIPQ70UQ0 350 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 LGI4Q8N135 537 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 ZNF321PQ8N8H1 164 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 DOK4Q8TEW6 326 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 ZNF721Q8TF20 911 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 ZNF75CPQ92670 426 aaPredicted RBP13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 EXOSC8Q96B26 276 aaKnown RBP13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 TUBGCP3Q96CW5 907 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 FBXL20Q96IG2 436 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 ART5Q96L15 291 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 ZNF681Q96N22 645 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 CNPPD1Q9BV87 410 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 RNF32Q9H0A6 362 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 CXorf21Q9HAI6 301 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 EHD3Q9NZN3 535 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 ABI3Q9P2A4 366 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 COPS7AQ9UBW8 275 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 GIMAP2Q9UG22 337 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 B3GNT3Q9Y2A9 372 aa13.51□□□□□ -0.25
SQSTM1-205ENST00000464493 HRKO00198 91 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 MAN1A2O60476 641 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 F10P00742 488 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 IGKV3-11P04433 115 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 SDC1P18827 310 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 NT5EP21589 574 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 MAPK1P28482 360 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 MLF1P58340 268 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 ERVK-8P63133 956 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 PLEKHN1Q494U1 663 aaPredicted RBP13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 COLEC12Q5KU26 742 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 C6orf136Q5SQH8 315 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 SLC6A19Q695T7 634 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 FAM180BQ6P0A1 224 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 Q6ZS92 163 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 TICAM1Q8IUC6 712 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 SAMD14Q8IZD0 417 aaPredicted RBP13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 BEST3Q8N1M1 668 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 ARMC10Q8N2F6 343 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 CATSPER1Q8NEC5 780 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 OR8K3Q8NH51 312 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 THAP3Q8WTV1 239 aaPredicted RBP13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 PNPLA2Q96AD5 504 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 CNRIP1Q96F85 164 aaPredicted RBP13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 EGLN2Q96KS0 407 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 PPP1R36Q96LQ0 422 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 MIEF1Q9NQG6 463 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 SLC35C2Q9NQQ7 365 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 GIMAP4Q9NUV9 329 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 BAIAP2L1Q9UHR4 511 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 ERVK-19Q9WJR5 959 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 CSAG2Q9Y5P2 127 aa13.5□□□□□ -0.25
SQSTM1-205ENST00000464493 PRRC2CQ9Y520 2896 aaKnown RBP13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 CDK2AP1O14519 115 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 PRKNO60260 465 aaPredicted RBP13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 ATP1B1P05026 303 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 BCKDHAP12694 445 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 CASRP41180 1078 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 HK2P52789 917 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 RNF4P78317 190 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 OCRLQ01968 901 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 TLR1Q15399 786 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 C6orf163Q5TEZ5 329 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 GALNT12Q8IXK2 581 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 CCDC116Q8IYX3 515 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 LRRC25Q8N386 305 aaPredicted RBP13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 FNDC5Q8NAU1 212 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 OR5L2Q8NGL0 311 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 LRRC8CQ8TDW0 803 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 DYDC1Q8WWB3 177 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 TSSK3Q96PN8 268 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 UTP23Q9BRU9 249 aaKnown RBP13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 NUF2Q9BZD4 464 aa13.49□□□□□ -0.25
SQSTM1-205ENST00000464493 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.49□□□□□ -0.257e-10■■□□□ 12.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms