RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 PLEKHF2Q9H8W4 249 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 PHF11Q9UIL8 331 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 SNX12Q9UMY4 172 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 EXPH5Q8NEV8 1989 aa15.86■□□□□ 0.13
HMGN1-210ENST00000464078 ZANQ9Y493 2812 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 CD8B2A6NJW9 211 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 OR6C76A6NM76 312 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 KDM4EB2RXH2 506 aaPredicted RBP15.85■□□□□ 0.13
HMGN1-210ENST00000464078 E7ESA3 106 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 TP73O15350 636 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 IL2RAP01589 272 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 HPNP05981 417 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 CCDC166P0CW27 439 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 CD1DP15813 335 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 ALOX15P16050 662 aaPredicted RBP15.85■□□□□ 0.13
HMGN1-210ENST00000464078 GDF1P27539 372 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 HOXC12P31275 282 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 TRPC1P48995 793 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 ARFIP1P53367 373 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 SLC37A1P57057 533 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 LTBQ06643 244 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 CBLBQ13191 982 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 KEAP1Q14145 624 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 RPS6KA2Q15349 733 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 OR4D1Q15615 310 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 NHSL2Q5HYW2 709 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 RNF111Q6ZNA4 994 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 ANKMY2Q8IV38 441 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 ZCCHC7Q8N3Z6 543 aaKnown RBP15.85■□□□□ 0.13
HMGN1-210ENST00000464078 SPATA6LQ8N4H0 392 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 ZNF441Q8N8Z8 693 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 PPWD1Q96BP3 646 aaKnown RBP15.85■□□□□ 0.13
HMGN1-210ENST00000464078 CMTM7Q96FZ5 175 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 C18orf12Q96KH6 178 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 GAL3ST4Q96RP7 486 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 KIAA1549Q9HCM3 1950 aa15.85■□□□□ 0.13
HMGN1-210ENST00000464078 IQANK1A0A1B0GTG1 560 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 MBD3L4A6NDZ8 208 aaPredicted RBP15.84■□□□□ 0.13
HMGN1-210ENST00000464078 MBD3L3A6NE82 208 aaPredicted RBP15.84■□□□□ 0.13
HMGN1-210ENST00000464078 MBD3L5A6NJ08 208 aaPredicted RBP15.84■□□□□ 0.13
HMGN1-210ENST00000464078 TP53I11O14683 189 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 SEC31AO94979 1220 aaKnown RBP15.84■□□□□ 0.13
HMGN1-210ENST00000464078 IL18BPO95998 194 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 GALNSP34059 522 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 CDK9P50750 372 aaKnown RBP15.84■□□□□ 0.13
HMGN1-210ENST00000464078 WNT3P56703 355 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 HERVK_113P63132 956 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 ERVK-8P63133 956 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 FASTKD3Q14CZ7 662 aaKnown RBP15.84■□□□□ 0.13
HMGN1-210ENST00000464078 DEPDC1Q5TB30 811 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 VASNQ6EMK4 673 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 OR4C11Q6IEV9 310 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 MED27Q6P2C8 311 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 GPR180Q86V85 440 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 KRTAP1-3Q8IUG1 177 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 TAGAPQ8N103 731 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 FBXO36Q8NEA4 188 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 OR7G3Q8NG95 312 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 MBD3L2Q8NHZ7 208 aaPredicted RBP15.84■□□□□ 0.13
HMGN1-210ENST00000464078 UBXN10Q96LJ8 280 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 JSRP1Q96MG2 331 aaPredicted RBP15.84■□□□□ 0.13
HMGN1-210ENST00000464078 SECISBP2Q96T21 854 aaKnown RBP15.84■□□□□ 0.13
HMGN1-210ENST00000464078 ERVK-6Q9BXR3 956 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 CD244Q9BZW8 370 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 CD274Q9NZQ7 290 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 JKAMPQ9P055 326 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 ADGRE2Q9UHX3 823 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 ERVK-19Q9WJR5 959 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 TSC22D4Q9Y3Q8 395 aa15.84■□□□□ 0.13
HMGN1-210ENST00000464078 PHGDHO43175 533 aaKnown RBP15.83■□□□□ 0.12
HMGN1-210ENST00000464078 CCNT2O60583 730 aaKnown RBP15.83■□□□□ 0.12
HMGN1-210ENST00000464078 SNX4O95219 450 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 LRATO95237 230 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 TGFB1P01137 390 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 CLPSP04118 112 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 TLX1P31314 330 aaPredicted RBP15.83■□□□□ 0.12
HMGN1-210ENST00000464078 PIK3CBP42338 1070 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 HNRNPH2P55795 449 aaKnown RBP15.83■□□□□ 0.12
HMGN1-210ENST00000464078 PDIA2Q13087 525 aaKnown RBP15.83■□□□□ 0.12
HMGN1-210ENST00000464078 SLAMF1Q13291 335 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 ZKSCAN8Q15776 578 aaPredicted RBP15.83■□□□□ 0.12
HMGN1-210ENST00000464078 FNDC7Q5VTL7 733 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 TMEM198Q66K66 360 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 UBTD2Q8WUN7 234 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 DIO2Q92813 273 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 GPR22Q99680 433 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 CAB39LQ9H9S4 337 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 C15orf41Q9Y2V0 281 aa15.83■□□□□ 0.12
HMGN1-210ENST00000464078 MTO1Q9Y2Z2 717 aaKnown RBP15.83■□□□□ 0.12
HMGN1-210ENST00000464078 CLCA1A8K7I4 914 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 CAPN14A8MX76 684 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 PLPP1O14494 284 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 GPR75O95800 540 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 S100BP04271 92 aaPredicted RBP15.82■□□□□ 0.12
HMGN1-210ENST00000464078 PCNAP12004 261 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 STMN1P16949 149 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 OPRM1P35372 400 aa15.82■□□□□ 0.12
HMGN1-210ENST00000464078 BUD31P41223 144 aaPredicted RBP15.82■□□□□ 0.12
HMGN1-210ENST00000464078 RPL21P46778 160 aaKnown RBP15.82■□□□□ 0.12
HMGN1-210ENST00000464078 TMED10P49755 219 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms