RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ARGLU1Q9NWB6 273 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TMEM216Q9P0N5 145 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 SLC24A2Q9UI40 661 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 MOSPD1Q9UJG1 213 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 PSMD13Q9UNM6 376 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 UNC13CQ8NB66 2214 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 SPENQ96T58 3664 aaKnown RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 HIVEP3Q5T1R4 2406 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TDRD6O60522 2096 aaKnown RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 FBN3Q75N90 2809 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 IGHV1OR21-1A0A087WYE8 117 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 A0A096LPK6 155 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 A6NCN8 305 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 KRTAP29-1A8MX34 341 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ADAM10O14672 748 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 GRID2O43424 1007 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 RGS10O43665 173 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 CDH16O75309 829 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 GPC4O75487 556 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 POP7O75817 140 aaKnown RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 STK17BO94768 372 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 SNRPAP09012 282 aaKnown RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 MSH3P20585 1137 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TEAD1P28347 426 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 RPA3P35244 121 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 NSG1P42857 185 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TTPAP49638 278 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 KIAA1024LP59773 190 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 PDE1BQ01064 536 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 SLC18A2Q05940 514 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 NAB1Q13506 487 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 RAB32Q13637 225 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ITGA9Q13797 1035 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 GTF2H3Q13889 308 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 CSHL1Q14406 222 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 GRB7Q14451 532 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 RASA2Q15283 850 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 GPR33Q49SQ1 333 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 NKAIN2Q5VXU1 208 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ZNF449Q6P9G9 518 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TIFABQ6ZNK6 161 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 KIAA0408Q6ZU52 694 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 CHST15Q7LFX5 561 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 GALNT7Q86SF2 657 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TRAPPC5Q8IUR0 188 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ESX1Q8N693 406 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 SIRT6Q8N6T7 355 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 BANPQ8N9N5 519 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 OR56A4Q8NGH8 313 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 HEXDCQ8WVB3 486 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ELMO1Q92556 727 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 CDKL2Q92772 493 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ESAMQ96AP7 390 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 LINGO1Q96FE5 620 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 PGM2Q96G03 612 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 ATP6V1G3Q96LB4 118 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 IL17FQ96PD4 163 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 C19orf43Q9BQ61 176 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 MECRQ9BV79 373 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TSPYL1Q9H0U9 437 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 DPEP2Q9H4A9 486 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 COG4Q9H9E3 785 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TRNAU1APQ9NX07 287 aaKnown RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 KLQ9UEF7 1012 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 TBC1D29Q9UFV1 150 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 FETUBQ9UGM5 382 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 PLAGL1Q9UM63 463 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 DHRS7Q9Y394 339 aa3.44□□□□□ -1.86
SCFD1-204ENST00000463622 PRRC2CQ9Y520 2896 aaKnown RBP3.44□□□□□ -1.86
SCFD1-204ENST00000463622 AKAP9Q99996 3911 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 NAV3Q8IVL0 2385 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 TMEM120BA0PK00 339 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 OR52A4PA6NMU1 304 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 RHPN2P1A8MT19 583 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ARHGEF33A8MVX0 844 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 G3V2L1 256 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 PSMD9O00233 223 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 FCHO1O14526 889 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 RGS16O15492 202 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 CREG1O75629 220 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 CEACAM4O75871 244 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 RASSF9O75901 435 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 IVLP07476 585 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 CCDC166P0CW27 439 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 CD1DP15813 335 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ZNF7P17097 686 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ATP5F1P24539 256 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 NFKBIAP25963 317 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ACADLP28330 430 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 TYK2P29597 1187 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 HPDP32754 393 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 SPRP35270 261 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 AGTR2P50052 363 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 SERPINB8P50452 374 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ADARP55265 1226 aaKnown RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 MAZP56270 477 aaKnown RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 RAB10P61026 200 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 HSPA14Q0VDF9 509 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 LAMB3Q13751 1172 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 CCNIQ14094 377 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms