RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ACVR2AP27037 513 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CLK3P49761 638 aaKnown RBP9.39□□□□□ -0.91
PTPRD-207ENST00000463477 TEKQ02763 1124 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 MVKQ03426 396 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 NFATC3Q12968 1075 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CAMK2BQ13554 666 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 RAPSNQ13702 412 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CYP2A13Q16696 494 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ZNF630Q2M218 657 aaPredicted RBP9.39□□□□□ -0.91
PTPRD-207ENST00000463477 C14orf28Q4W4Y0 310 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 PERM1Q5SV97 790 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 PRAMEF13Q5VWM6 474 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 KIAA1614Q5VZ46 1190 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ANKRD34AQ69YU3 496 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ANKRD26P1Q6NSI1 321 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 TRIM40Q6P9F5 258 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 TMIGD1Q6UXZ0 262 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 VTCN1Q7Z7D3 282 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 LRRTM4Q86VH4 590 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 ANKRD13BQ86YJ7 626 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 NAGSQ8N159 534 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CDC26Q8NHZ8 85 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 FKBP10Q96AY3 582 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 PPCDCQ96CD2 204 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 PSD2Q9BQI7 771 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 LHPPQ9H008 270 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 WASH6PQ9NQA3 447 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 C1GALT1Q9NS00 363 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 TAS2R9Q9NYW1 312 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 PDP1Q9P0J1 537 aaPredicted RBP9.39□□□□□ -0.91
PTPRD-207ENST00000463477 SH3BP4Q9P0V3 963 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 SPATA7Q9P0W8 599 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 LRIT1Q9P2V4 623 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 CLCA2Q9UQC9 943 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 SH2B3Q9UQQ2 575 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 SAMHD1Q9Y3Z3 626 aaKnown RBP9.39□□□□□ -0.91
PTPRD-207ENST00000463477 PRKAB1Q9Y478 270 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 U3KQV3 271 aa9.39□□□□□ -0.91
PTPRD-207ENST00000463477 PRR19A6NJB7 356 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 OR5K4A6NMS3 321 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 NTN3O00634 580 aaPredicted RBP9.38□□□□□ -0.91
PTPRD-207ENST00000463477 GCM2O75603 506 aaPredicted RBP9.38□□□□□ -0.91
PTPRD-207ENST00000463477 IFNA14P01570 189 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 C1QCP02747 245 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 INHBBP09529 407 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 MATN1P21941 496 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 PLA2G16P53816 162 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 HBA1P69905 142 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 SLC35A2P78381 396 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 IL5RAQ01344 420 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 EEF1A2Q05639 463 aaKnown RBP9.38□□□□□ -0.91
PTPRD-207ENST00000463477 C2orf80Q0P641 193 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 PPP1R8Q12972 351 aaKnown RBP9.38□□□□□ -0.91
PTPRD-207ENST00000463477 TARDBPQ13148 414 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPRD-207ENST00000463477 NFE2L1Q14494 772 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 C16orf72Q14CZ0 275 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 SF1Q15637 639 aaKnown RBP9.38□□□□□ -0.91
PTPRD-207ENST00000463477 CRB2Q5IJ48 1285 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 GCNT6Q5T4J0 391 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 HES3Q5TGS1 186 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 MLIPQ5VWP3 458 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 AMZ2Q86W34 360 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 SFTPA2Q8IWL1 248 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 ARL14Q8N4G2 192 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 TTC29Q8NA56 475 aaPredicted RBP9.38□□□□□ -0.91
PTPRD-207ENST00000463477 TBC1D15Q8TC07 691 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 IPCEF1Q8WWN9 437 aaPredicted RBP9.38□□□□□ -0.91
PTPRD-207ENST00000463477 THAP11Q96EK4 314 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 HRASLS5Q96KN8 279 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 BARD1Q99728 777 aaKnown RBP9.38□□□□□ -0.91
PTPRD-207ENST00000463477 DPH2Q9BQC3 489 aaPredicted RBP9.38□□□□□ -0.91
PTPRD-207ENST00000463477 CCDC3Q9BQI4 270 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 SLC35A5Q9BS91 424 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 TIMM29Q9BSF4 260 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 OCEL1Q9H607 264 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 EPS8L2Q9H6S3 715 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 PALMDQ9NP74 551 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 KRT84Q9NSB2 600 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 GPATCH2Q9NW75 528 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 THUMPD1Q9NXG2 353 aaKnown RBP9.38□□□□□ -0.91
PTPRD-207ENST00000463477 SCN3BQ9NY72 215 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 ETAA1Q9NY74 926 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 TBC1D29Q9UFV1 150 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 SLC23A2Q9UGH3 650 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 ENPP5Q9UJA9 477 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 GMPPBQ9Y5P6 360 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 PTPRBP23467 1997 aa9.38□□□□□ -0.91
PTPRD-207ENST00000463477 AKAP13Q12802 2813 aa9.37□□□□□ -0.91
PTPRD-207ENST00000463477 A0A1W2PPW3 197 aa9.37□□□□□ -0.91
PTPRD-207ENST00000463477 MYO1GB0I1T2 1018 aa9.37□□□□□ -0.91
PTPRD-207ENST00000463477 B4DGG1 531 aa9.37□□□□□ -0.91
PTPRD-207ENST00000463477 hCG_2039718K7EN88 272 aa9.37□□□□□ -0.91
PTPRD-207ENST00000463477 MITFO75030 526 aaPredicted RBP9.37□□□□□ -0.91
PTPRD-207ENST00000463477 NUDT7P0C024 238 aa9.37□□□□□ -0.91
PTPRD-207ENST00000463477 ARAFP10398 606 aa9.37□□□□□ -0.91
PTPRD-207ENST00000463477 ACP5P13686 325 aa9.37□□□□□ -0.91
PTPRD-207ENST00000463477 ANXA8P13928 327 aa9.37□□□□□ -0.91
PTPRD-207ENST00000463477 ITGA2P17301 1181 aa9.37□□□□□ -0.91
PTPRD-207ENST00000463477 EFNA1P20827 205 aaPredicted RBP9.37□□□□□ -0.91
PTPRD-207ENST00000463477 AGXTP21549 392 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms