RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 KCNK13Q9HB14 408 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 GIMAP4Q9NUV9 329 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 AIG1Q9NVV5 245 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 ATP6V1HQ9UI12 483 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 DCTN4Q9UJW0 460 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 PPIEQ9UNP9 301 aaKnown RBP11.01□□□□□ -0.65
CPNE1-221ENST00000462352 ENTPD4Q9Y227 616 aa11.01□□□□□ -0.65
CPNE1-221ENST00000462352 A0A0G2JND7 137 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 A6NL46 340 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 MYO1GB0I1T2 1018 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 E9PBE3 544 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 ANKRD28O15084 1053 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 UBDO15205 165 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 KLHL41O60662 606 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 DDAH2O95865 285 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 ATP1B1P05026 303 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 TROVE2P10155 538 aaKnown RBP eCLIP11□□□□□ -0.65
CPNE1-221ENST00000462352 ITGAMP11215 1152 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 PRPS1L1P21108 318 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 GALNSP34059 522 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 PTGER1P34995 402 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 RPL3P39023 403 aaKnown RBP11□□□□□ -0.65
CPNE1-221ENST00000462352 GPR143P51810 404 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 PGDP52209 483 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 POLE2P56282 527 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 CLDN8P56748 225 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 SPRED3Q2MJR0 410 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 LINC00303Q3SY05 128 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF385BQ569K4 471 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 R3HCC1LQ7Z5L2 792 aaKnown RBP11□□□□□ -0.65
CPNE1-221ENST00000462352 GALNT12Q8IXK2 581 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 CCDC116Q8IYX3 515 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 FAM9CQ8IZT9 166 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 APCDD1LQ8NCL9 501 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 MORN4Q8NDC4 146 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 OR7A2PQ8NGA2 310 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 SUN3Q8TAQ9 357 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 SLC2A12Q8TD20 617 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 ELP5Q8TE02 316 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 DOK4Q8TEW6 326 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 STON2Q8WXE9 905 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 TTC9Q92623 222 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 RIT1Q92963 219 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 NCLNQ969V3 563 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 CHMP6Q96FZ7 201 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 THOC3Q96J01 351 aaKnown RBP11□□□□□ -0.65
CPNE1-221ENST00000462352 MARK4Q96L34 752 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 BBS4Q96RK4 519 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 DPY30Q9C005 99 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 BRINP2Q9C0B6 783 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 OR8D2Q9GZM6 311 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 LHPPQ9H008 270 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 CXorf21Q9HAI6 301 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 MMP25Q9NPA2 562 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 SH3BP4Q9P0V3 963 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 G3BP2Q9UN86 482 aaKnown RBP11□□□□□ -0.65
CPNE1-221ENST00000462352 GPR45Q9Y5Y3 372 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 CACNA1GO43497 2377 aa11□□□□□ -0.65
CPNE1-221ENST00000462352 MED13Q9UHV7 2174 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 HRKO00198 91 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 PDPK1O15530 556 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 DYRK3O43781 588 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 CEACAM4O75871 244 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 CT62P0C5K7 136 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 IDO1P14902 403 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 PCSK2P16519 638 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 NT5EP21589 574 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 NTSP30990 170 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 LSP1P33241 339 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 MPIP34949 423 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 NME5P56597 212 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 C21orf58P58505 322 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 AP2B1P63010 937 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 SF3A3Q12874 501 aaKnown RBP eCLIP10.99□□□□□ -0.658e-31■■■□□ 14.8
CPNE1-221ENST00000462352 RAPSNQ13702 412 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF267Q14586 743 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-221ENST00000462352 LTB4RQ15722 352 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 GSTA3Q16772 222 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 MPEG1Q2M385 716 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 PRICKLE4Q2TBC4 344 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 JMJD6Q6NYC1 403 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-221ENST00000462352 KIF2BQ8N4N8 673 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF321PQ8N8H1 164 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 FDCSPQ8NFU4 85 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 OR1N1Q8NGS0 311 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF721Q8TF20 911 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 PSMF1Q92530 271 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 CIDECQ96AQ7 238 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-221ENST00000462352 VMP1Q96GC9 406 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 SENP5Q96HI0 755 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-221ENST00000462352 ART5Q96L15 291 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 ARHGAP9Q9BRR9 750 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 CNPPD1Q9BV87 410 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 TMEM120AQ9BXJ8 343 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 SLAMF7Q9NQ25 335 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 MAT2BQ9NZL9 334 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF223Q9UK11 482 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-221ENST00000462352 MAPRE3Q9UPY8 281 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 ERVK-19Q9WJR5 959 aa10.99□□□□□ -0.65
CPNE1-221ENST00000462352 KMT2BQ9UMN6 2715 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms