RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 KCNK13Q9HB14 408 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ASIC5Q9NY37 505 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TAS2R7Q9NYW3 318 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 NOP53Q9NZM5 478 aaKnown RBP10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 EIF3LQ9Y262 564 aaKnown RBP10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TP53TG5Q9Y2B4 290 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SPENQ96T58 3664 aaKnown RBP10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 MYOCOSA0A1B0GUC4 107 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 CDK2AP1O14519 115 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 DPM1O60762 260 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TBX19O60806 448 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 DDAH2O95865 285 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 LBPP18428 481 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 HPCAL1P37235 193 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 GPR143P51810 404 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 MFAP5Q13361 173 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 CEBPEQ15744 281 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 IL23RQ5VWK5 629 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 OGFOD2Q6N063 350 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 H3F3CQ6NXT2 135 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 IGFL2Q6UWQ7 119 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 IGFL3Q6UXB1 125 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ISLR2Q6UXK2 745 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ASB18Q6ZVZ8 466 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 R3HCC1LQ7Z5L2 792 aaKnown RBP10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TICAM1Q8IUC6 712 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 WDR75Q8IWA0 830 aaKnown RBP10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 FAM9CQ8IZT9 166 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 LGI4Q8N135 537 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SIRT6Q8N6T7 355 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 OR1N1Q8NGS0 311 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 OR8K3Q8NH51 312 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SLC39A7Q92504 469 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 NCLNQ969V3 563 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 EXOSC8Q96B26 276 aaKnown RBP10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PPWD1Q96BP3 646 aaKnown RBP10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 MTERF3Q96E29 417 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 EGLN2Q96KS0 407 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ZNF354BQ96LW1 612 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ZNF681Q96N22 645 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TSSK3Q96PN8 268 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 LMF1Q96S06 567 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 C1orf50Q9BV19 199 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 DEFB126Q9BYW3 111 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SEMA4CQ9C0C4 833 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 OR8D2Q9GZM6 311 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 REEP4Q9H6H4 257 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SLCO1B3Q9NPD5 702 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SLC35C2Q9NQQ7 365 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ABI3Q9P2A4 366 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PTGFRNQ9P2B2 879 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 GIMAP2Q9UG22 337 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 MAPRE3Q9UPY8 281 aa10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TLN1Q9Y490 2541 aaKnown RBP10.87□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TRBV11-1A0A0K0K1C0 115 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SDHDO14521 159 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ZFAND5O76080 213 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TGDSO95455 350 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 IGKV3-11P04433 115 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 NT5EP21589 574 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 EPHA3P29320 983 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 NTSP30990 170 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 MPIP34949 423 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 FEN1P39748 380 aaKnown RBP10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PDE7AQ13946 482 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 MEP1AQ16819 746 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ABHD17BQ5VST6 288 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 HSDL2Q6YN16 418 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 LARP4Q71RC2 724 aaKnown RBP eCLIP10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ARMC10Q8N2F6 343 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 LIX1Q8N485 282 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 KIF2BQ8N4N8 673 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 CLHC1Q8NHS4 586 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ZNF721Q8TF20 911 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 CNRIP1Q96F85 164 aaPredicted RBP10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SENP5Q96HI0 755 aaPredicted RBP10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 MAELQ96JY0 434 aaKnown RBP10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 BBS4Q96RK4 519 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 CNPPD1Q9BV87 410 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 CXorf21Q9HAI6 301 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ZNF71Q9NQZ8 489 aaPredicted RBP10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 BAIAP2L1Q9UHR4 511 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 EXO1Q9UQ84 846 aaKnown RBP10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 USH1CQ9Y6N9 552 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 MED13Q9UHV7 2174 aa10.86□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ATRXP46100 2492 aa10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 A0A1W2PS29 197 aa10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 OR6C76A6NM76 312 aa10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 A8MUI8 341 aa10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ZNF195O14628 629 aa10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SCAMP2O15127 329 aaKnown RBP10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SLITRK5O94991 958 aa10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 LRATO95237 230 aa10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PDGFAP04085 211 aa10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 G6PDP11413 515 aa10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PRPS1L1P21108 318 aa10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 C21orf58P58505 322 aa10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 FUT7Q11130 342 aa10.85□□□□□ -0.67
TRAF3IP1-204ENST00000462122 MAP4K2Q12851 820 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms