RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 KLHL12Q53G59 568 aa14.73□□□□□ -0.05
SSR4-206ENST00000460616 CRB2Q5IJ48 1285 aa14.73□□□□□ -0.05
SSR4-206ENST00000460616 CEACAM20Q6UY09 585 aa14.73□□□□□ -0.05
SSR4-206ENST00000460616 OR52I1Q8NGK6 324 aa14.73□□□□□ -0.05
SSR4-206ENST00000460616 PMEPA1Q969W9 287 aa14.73□□□□□ -0.05
SSR4-206ENST00000460616 CASD1Q96PB1 797 aa14.73□□□□□ -0.05
SSR4-206ENST00000460616 NT5DC2Q9H857 520 aa14.73□□□□□ -0.05
SSR4-206ENST00000460616 DNAJC11Q9NVH1 559 aa14.73□□□□□ -0.05
SSR4-206ENST00000460616 RAB23Q9ULC3 237 aa14.73□□□□□ -0.05
SSR4-206ENST00000460616 KIAA1671Q9BY89 1806 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 TRBV4-1A0A0J9YWV2 114 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 ATP6V1G2-DDX39BF2Z307 99 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 SH3BGRLO75368 114 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 ADAP00813 363 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 DDCP20711 480 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 ASMTP46597 345 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 XKP51811 444 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 BTG1P62324 171 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 SNAPC1Q16533 368 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 OCLNQ16625 522 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 COL28A1Q2UY09 1125 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 LYPLAL1Q5VWZ2 237 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 C12orf73Q69YU5 71 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 BRAT1Q6PJG6 821 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 ZNF366Q8N895 744 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 PKP4Q99569 1192 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 SLC35A5Q9BS91 424 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 ELAC1Q9H777 363 aaKnown RBP14.72□□□□□ -0.05
SSR4-206ENST00000460616 HEXA-AS1Q9H8Q6 139 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 ZFYVE1Q9HBF4 777 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 PRM3Q9NNZ6 103 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 ZFP64Q9NPA5 681 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 UCKL1Q9NWZ5 548 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 ZNF222Q9UK12 451 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 RWDD3Q9Y3V2 267 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 MGAT4DA6NG13 374 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 QSOX1O00391 747 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 TLX2O43763 284 aaPredicted RBP14.72□□□□□ -0.05
SSR4-206ENST00000460616 LZTS3O60299 673 aaPredicted RBP14.72□□□□□ -0.05
SSR4-206ENST00000460616 ACSL4O60488 711 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 BPIP17213 487 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 AVPR1BP47901 424 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 HNMTP50135 292 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 CTBP2P56545 445 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 HBA1P69905 142 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 IRF8Q02556 426 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 UBE3AQ05086 875 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 LRRC32Q14392 662 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 FGFBP1Q14512 234 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 TMEM107Q6UX40 140 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 FAM92BQ6ZTR7 304 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 GPALPP1Q8IXQ4 340 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 TTC9BQ8N6N2 239 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 OR4K1Q8NGD4 311 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 OR52N2Q8NGI0 321 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 HUS1BQ8NHY5 278 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 FUBP3Q96I24 572 aaKnown RBP eCLIP14.72□□□□□ -0.05
SSR4-206ENST00000460616 SORCS2Q96PQ0 1159 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 SLC12A9Q9BXP2 914 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 LIN7BQ9HAP6 207 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 C1GALT1Q9NS00 363 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 TVP23BQ9NYZ1 205 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 PCDHB8Q9UN66 801 aa14.72□□□□□ -0.05
SSR4-206ENST00000460616 SF3B6Q9Y3B4 125 aaKnown RBP14.72□□□□□ -0.05
SSR4-206ENST00000460616 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.71□□□□□ -0.05
SSR4-206ENST00000460616 C2orf78A6NCI8 922 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 RNASET2O00584 256 aaKnown RBP14.71□□□□□ -0.05
SSR4-206ENST00000460616 FZD6O60353 706 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 NR2F6P10588 404 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 HK1P19367 917 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 WNT4P56705 351 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 FABP5Q01469 135 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 ZNF177Q13360 481 aaPredicted RBP14.71□□□□□ -0.05
SSR4-206ENST00000460616 RIN1Q13671 783 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 CHRNA6Q15825 494 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 OR2G6Q5TZ20 316 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 GPR139Q6DWJ6 353 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 TYW3Q6IPR3 259 aaKnown RBP14.71□□□□□ -0.05
SSR4-206ENST00000460616 QSOX2Q6ZRP7 698 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 PRSS42Q7Z5A4 293 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 NPAS4Q8IUM7 802 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 ATAD1Q8NBU5 361 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 PCNPQ8WW12 178 aaKnown RBP14.71□□□□□ -0.05
SSR4-206ENST00000460616 GATAD2BQ8WXI9 593 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 UCN3Q969E3 161 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 ATF6BQ99941 703 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 DPCDQ9BVM2 203 aaPredicted RBP14.71□□□□□ -0.05
SSR4-206ENST00000460616 HDHD2Q9H0R4 259 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 ATG10Q9H0Y0 220 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 TMEM38AQ9H6F2 299 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 SPATA6Q9NWH7 488 aaPredicted RBP14.71□□□□□ -0.05
SSR4-206ENST00000460616 MAP4K5Q9Y4K4 846 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 TRBV5-4A0A0C4DH59 114 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 GLYATL1P3A0A0U1RQE8 302 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 ABHD14A-ACY1A0A1B0GW23 586 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 GTPBP1O00178 669 aaKnown RBP14.71□□□□□ -0.05
SSR4-206ENST00000460616 FFAR1O14842 300 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 INPPL1O15357 1258 aa14.71□□□□□ -0.05
SSR4-206ENST00000460616 AKAP8O43823 692 aaKnown RBP14.71□□□□□ -0.05
SSR4-206ENST00000460616 CLDN11O75508 207 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms