RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CDH10Q9Y6N8 788 aa14.09□□□□□ -0.15
PTPRU-205ENST00000460170 SLC35F4A4IF30 521 aa14.08□□□□□ -0.15
PTPRU-205ENST00000460170 B4GAT1O43505 415 aa14.08□□□□□ -0.15
PTPRU-205ENST00000460170 TFAP2AP05549 437 aa14.08□□□□□ -0.15
PTPRU-205ENST00000460170 VSX2P58304 361 aaPredicted RBP14.08□□□□□ -0.15
PTPRU-205ENST00000460170 SPARTQ8N0X7 666 aa14.08□□□□□ -0.15
PTPRU-205ENST00000460170 DRAXINQ8NBI3 349 aaPredicted RBP14.08□□□□□ -0.15
PTPRU-205ENST00000460170 OR5AR1Q8NGP9 310 aa14.08□□□□□ -0.15
PTPRU-205ENST00000460170 RIT1Q92963 219 aa14.08□□□□□ -0.15
PTPRU-205ENST00000460170 MAELQ96JY0 434 aaKnown RBP14.08□□□□□ -0.15
PTPRU-205ENST00000460170 PELI2Q9HAT8 420 aa14.08□□□□□ -0.15
PTPRU-205ENST00000460170 HCFC1R1Q9NWW0 138 aa14.08□□□□□ -0.15
PTPRU-205ENST00000460170 OR1A2Q9Y585 309 aa14.08□□□□□ -0.15
PTPRU-205ENST00000460170 CEPT1Q9Y6K0 416 aa14.08□□□□□ -0.15
PTPRU-205ENST00000460170 PAPPAQ13219 1627 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 RPL34P49207 117 aaKnown RBP14.08□□□□□ -0.16
PTPRU-205ENST00000460170 BMXP51813 675 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 TSPAN5P62079 268 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 RPS15AP62244 130 aaKnown RBP14.08□□□□□ -0.16
PTPRU-205ENST00000460170 NDUFAF5Q5TEU4 345 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 FAM180BQ6P0A1 224 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 QSOX2Q6ZRP7 698 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 SNX29P2Q8IUI4 249 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 CCDC36Q8IYA8 594 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 OR51A7Q8NH64 312 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 PIGUQ9H490 435 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 DMRT3Q9NQL9 472 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 ENAMQ9NRM1 1142 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 NHSQ6T4R5 1651 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 IGLV3-10A0A075B6K4 115 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 GRXCR1A8MXD5 290 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 LCKP06239 509 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 TM4SF4P48230 202 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 MAB21L1Q13394 359 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 DPPA4Q7L190 304 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.08□□□□□ -0.16
PTPRU-205ENST00000460170 IFT46Q9NQC8 304 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 C14orf119Q9NWQ9 140 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 C5AR2Q9P296 337 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 OSMP13725 252 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 C5AR1P21730 350 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 SLC9A3P48764 834 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 PPP5CP53041 499 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 RAB30Q15771 203 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 LIPIQ6XZB0 460 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 TMEM102Q8N9M5 508 aaPredicted RBP14.08□□□□□ -0.16
PTPRU-205ENST00000460170 OR9Q2Q8NGE9 314 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 OR2AJ1Q8NGZ0 328 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 KLHDC7BQ96G42 594 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 SAMD11Q96NU1 681 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 PRRG4Q9BZD6 226 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 CENPMQ9NSP4 180 aa14.08□□□□□ -0.16
PTPRU-205ENST00000460170 MRPS14O60783 128 aaKnown RBP14.07□□□□□ -0.16
PTPRU-205ENST00000460170 HK3P52790 923 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 CTSCP53634 463 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 C22orf42Q6IC83 251 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 BTN2A1Q7KYR7 527 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 SLC37A3Q8NCC5 494 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 TMEM184CQ9NVA4 438 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 GRIP1Q9Y3R0 1128 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 PCDHA9Q9Y5H5 950 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 OR6C74A6NCV1 312 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 UNC119BA6NIH7 251 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 GABRR3A8MPY1 467 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 UBFD1O14562 309 aaKnown RBP14.07□□□□□ -0.16
PTPRU-205ENST00000460170 ACOT8O14734 319 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 FLRT2O43155 660 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 PRODHO43272 600 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 GABBR2O75899 941 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 GADD45AP24522 165 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 GRIN2CQ14957 1233 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 FAM26DQ5JW98 314 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 RPL13AP3Q6NVV1 102 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 CIDECQ96AQ7 238 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-205ENST00000460170 PCDHGB6Q9Y5F9 930 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 AKIRIN2Q53H80 203 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 RASSF6Q6ZTQ3 369 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 THEM6Q8WUY1 208 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 RBCK1Q9BYM8 510 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 NMNAT1Q9HAN9 279 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-205ENST00000460170 SLC2A4RGQ9NR83 387 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 RGS17Q9UGC6 210 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-205ENST00000460170 INTS6Q9UL03 887 aaKnown RBP14.07□□□□□ -0.16
PTPRU-205ENST00000460170 A0A0G2JPF8 293 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 HNRNPCL3B7ZW38 293 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 MRPL3P09001 348 aaKnown RBP14.07□□□□□ -0.16
PTPRU-205ENST00000460170 HNRNPCL4P0DMR1 293 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 NDUFV2P19404 249 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 SELPLGQ14242 412 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 DNM1P34Q6PK57 102 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 SERINC1Q9NRX5 453 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 STUB1Q9UNE7 303 aa14.07□□□□□ -0.16
PTPRU-205ENST00000460170 RBM7Q9Y580 266 aaKnown RBP14.07□□□□□ -0.16
PTPRU-205ENST00000460170 MC1RQ01726 317 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 ANKRD13BQ86YJ7 626 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 BADQ92934 168 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 OR8D2Q9GZM6 311 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 EXTL2Q9UBQ6 330 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 HCN2Q9UL51 889 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 A0A1B0GVT2 93 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms