RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 C2orf78A6NCI8 922 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 PRAMEF10O60809 474 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 FGF19O95750 216 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 PTHP01270 115 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 F11P03951 625 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 NMBP08949 121 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 ACAA1P09110 424 aaPredicted RBP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 PIPP12273 146 aaPredicted RBP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 PREPP48147 710 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 FNTBP49356 437 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SMAD3P84022 425 aaKnown RBP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 OPCMLQ14982 345 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 TRAM2Q15035 370 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SNAPC1Q16533 368 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 TSTQ16762 297 aaKnown RBP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 PTCHD3Q3KNS1 767 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 UNC50Q53HI1 259 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 MARC1Q5VT66 337 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 FGD2Q7Z6J4 655 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SKA3Q8IX90 412 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 KLHDC8BQ8IXV7 354 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 KREMEN2Q8NCW0 462 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 OR4A15Q8NGL6 344 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SCRN2Q96FV2 425 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SLC38A3Q99624 504 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 CNPPD1Q9BV87 410 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 KLF16Q9BXK1 252 aaPredicted RBP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 FSD1LQ9BXM9 530 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 GSDMCQ9BYG8 508 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SLC29A3Q9BZD2 475 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 MAGEH1Q9H213 219 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 MED11Q9P086 117 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 IKZF3Q9UKT9 509 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SAMD4AQ9UPU9 718 aaKnown RBP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 PCDHGA6Q9Y5G7 932 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SLC22A7Q9Y694 548 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 EFCAB7A8K855 629 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 FAM220BPB1ANY3 271 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 MPZL2O60487 215 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 CREG1O75629 220 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 EIF3GO75821 320 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 CFDP00746 253 aaPredicted RBP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 ZNF806P0C7X5 589 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 IRF1P10914 325 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 ARSAP15289 507 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SAT1P21673 171 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 GABRR2P28476 465 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SOX11P35716 441 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 AVPR1AP37288 418 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 HNMTP50135 292 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 P2RY4P51582 365 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SERINC3Q13530 473 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 ATP6AP1LQ52LC2 224 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 PAN3Q58A45 887 aaKnown RBP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 C3orf38Q5JPI3 329 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 RNLSQ5VYX0 342 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 ATG9BQ674R7 924 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 C3orf33Q6P1S2 294 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 LILRA6Q6PI73 481 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 KIAA0907Q7Z7F0 614 aaPredicted RBP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SLC9B2Q86UD5 537 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 ZDHHC21Q8IVQ6 265 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 CEP97Q8IW35 865 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 KLHL36Q8N4N3 616 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 FAM86B1Q8N7N1 296 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 TMEM163Q8TC26 289 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 GLYATL2Q8WU03 294 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 PABPC5Q96DU9 382 aaKnown RBP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 ZNF599Q96NL3 588 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 GFM1Q96RP9 751 aaKnown RBP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 YIPF4Q9BSR8 244 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 BTBD1Q9H0C5 482 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 ANKRD19PQ9H560 264 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 IMPAD1Q9NX62 359 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 SLC6A14Q9UN76 642 aa10.82□□□□□ -0.68
DDX39B-214ENST00000458640 ZFP37Q9Y6Q3 630 aaPredicted RBP10.82□□□□□ -0.68
DDX39B-214ENST00000458640 DENND4CQ5VZ89 1909 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.81□□□□□ -0.68
DDX39B-214ENST00000458640 HPGDSO60760 199 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 APOC3P02656 99 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 RLN2P04090 185 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 HLA-DQB2P05538 268 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 RB1P06400 928 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 CKMP06732 381 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 LCN1P31025 176 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 SLC6A4P31645 630 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 PLIN5Q00G26 463 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 ST3GAL4Q11206 333 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 ZNF177Q13360 481 aaPredicted RBP10.81□□□□□ -0.68
DDX39B-214ENST00000458640 CAMK2GQ13555 558 aaPredicted RBP10.81□□□□□ -0.68
DDX39B-214ENST00000458640 DMC1Q14565 340 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 CHRNA6Q15825 494 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 COL13A1Q5TAT6 717 aaPredicted RBP10.81□□□□□ -0.68
DDX39B-214ENST00000458640 PLPP4Q5VZY2 271 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 PKN3Q6P5Z2 889 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 USP53Q70EK8 1073 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 TMEM150AQ86TG1 271 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 CCDC71Q8IV32 467 aaPredicted RBP10.81□□□□□ -0.68
DDX39B-214ENST00000458640 PDZD9Q8IXQ8 264 aa10.81□□□□□ -0.68
DDX39B-214ENST00000458640 MRPL43Q8N983 215 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms