RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 COL28A1Q2UY09 1125 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 ZNF367Q7RTV3 350 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 OR51L1Q8NGJ5 315 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 OR8K5Q8NH50 307 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 ANHXE9PGG2 379 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 F5H0A9 414 aaPredicted RBP18.81■□□□□ 0.6
SNX27-204ENST00000458013 RFPL1O75677 317 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 PFKLP17858 780 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 LEG1Q6P5S2 330 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 OR52P1PQ8NH57 321 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 MAELQ96JY0 434 aaKnown RBP18.81■□□□□ 0.6
SNX27-204ENST00000458013 SYNPO2LQ9H987 977 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 MRC1P22897 1456 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 PIM1P11309 404 aaPredicted RBP18.81■□□□□ 0.6
SNX27-204ENST00000458013 UNC50Q53HI1 259 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 RNF111Q6ZNA4 994 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 PROKR1Q8TCW9 393 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 GLT8D1Q68CQ7 371 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 TRAPPC6BQ86SZ2 158 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 ZSWIM9Q86XI8 627 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 PRR22Q8IZ63 422 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 OR2T33Q8NG76 320 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 FOXN4Q96NZ1 517 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 SSX3Q99909 188 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 TMEM121BQ9BXQ6 578 aaPredicted RBP18.81■□□□□ 0.6
SNX27-204ENST00000458013 GLS2Q9UI32 602 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 AGAP5A6NIR3 686 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 PRICKLE3O43900 615 aaPredicted RBP18.81■□□□□ 0.6
SNX27-204ENST00000458013 OR56A3Q8NH54 315 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 C7orf50Q9BRJ6 194 aaKnown RBP18.81■□□□□ 0.6
SNX27-204ENST00000458013 INPP5KQ9BT40 448 aa18.81■□□□□ 0.6
SNX27-204ENST00000458013 RAD51DO75771 328 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 RASAL1O95294 804 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 GSTT2P0CG29 244 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 ZNF616Q08AN1 781 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 SHQ1Q6PI26 577 aaKnown RBP18.8■□□□□ 0.6
SNX27-204ENST00000458013 H7C417 338 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 FMO6PO60774 539 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 OR4D2P58180 307 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 OR4K13Q8NH42 304 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 PCDHB3Q9Y5E6 796 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 BMP1P13497 986 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 LRRC15Q8TF66 581 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 NECAB3Q96P71 396 aaPredicted RBP18.8■□□□□ 0.6
SNX27-204ENST00000458013 AP1S3Q96PC3 154 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 RXFP3Q9NSD7 469 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 PAQR5Q9NXK6 330 aaPredicted RBP18.8■□□□□ 0.6
SNX27-204ENST00000458013 ICKQ9UPZ9 632 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 MT-ND2P03891 347 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 LPAL2Q16609 132 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 PIGGQ5H8A4 983 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 NDNFQ8TB73 568 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 DOHHQ9BU89 302 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 MRM3Q9HC36 420 aaKnown RBP18.8■□□□□ 0.6
SNX27-204ENST00000458013 ETFAP13804 333 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 TSPAN33Q86UF1 283 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 SIGLEC10Q96LC7 697 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 KLHL15Q96M94 604 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 BOCQ9BWV1 1114 aa18.8■□□□□ 0.6
SNX27-204ENST00000458013 CIB4A0PJX0 185 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 ADAP00813 363 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 OPN1LWP04000 364 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 CD3GP09693 182 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 NIPAL4Q0D2K0 466 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 PLBD1Q6P4A8 553 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 OR4D6Q8NGJ1 314 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 PITX2Q99697 317 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 C19orf25Q9UFG5 118 aaPredicted RBP18.79■□□□□ 0.6
SNX27-204ENST00000458013 RHOP08100 348 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 OTX2P32243 289 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 TAS2R43P59537 309 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 MVKQ03426 396 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 UPP1Q16831 310 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 ZNF805Q5CZA5 627 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 DPY19L3Q6ZPD9 716 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 SAV1Q9H4B6 383 aaPredicted RBP18.79■□□□□ 0.6
SNX27-204ENST00000458013 GPRC5BQ9NZH0 403 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 CARD8Q9Y2G2 431 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 FXYD4P59646 89 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 RAB4BP61018 213 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 PPIL3Q9H2H8 161 aaKnown RBP18.79■□□□□ 0.6
SNX27-204ENST00000458013 FAM118AQ9NWS6 357 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 HMGB3O15347 200 aaKnown RBP18.79■□□□□ 0.6
SNX27-204ENST00000458013 TPPPO94811 219 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 PYCR1P32322 319 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 S100A12P80511 92 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 IRF7Q92985 503 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 ZNF442Q9H7R0 627 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 SLIT2O94813 1529 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 RBBP9O75884 186 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 BBS10Q8TAM1 723 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 DDX1Q92499 740 aaKnown RBP18.79■□□□□ 0.6
SNX27-204ENST00000458013 RPH3AQ9Y2J0 694 aaPredicted RBP18.79■□□□□ 0.6
SNX27-204ENST00000458013 SHPRHQ149N8 1683 aa18.79■□□□□ 0.6
SNX27-204ENST00000458013 ANXA3P12429 323 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 CD53P19397 219 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 ITGB8P26012 769 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 SOX3P41225 446 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 GNMTQ14749 295 aa18.78■□□□□ 0.6
SNX27-204ENST00000458013 ERN2Q76MJ5 926 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms