RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 GTPBP3Q969Y2 492 aaKnown RBP15.77■□□□□ 0.12
CCDC43-202ENST00000457422 HSPBAP1Q96EW2 488 aa15.77■□□□□ 0.12
CCDC43-202ENST00000457422 TREX2Q9BQ50 279 aaPredicted RBP15.77■□□□□ 0.12
CCDC43-202ENST00000457422 OR51I1Q9H343 314 aa15.77■□□□□ 0.12
CCDC43-202ENST00000457422 SYNPO2LQ9H987 977 aa15.77■□□□□ 0.12
CCDC43-202ENST00000457422 SLC28A3Q9HAS3 691 aa15.77■□□□□ 0.12
CCDC43-202ENST00000457422 KLHL20Q9Y2M5 609 aa15.77■□□□□ 0.12
CCDC43-202ENST00000457422 GLOD5A6NK44 160 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 ZAR1LA6NP61 321 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 SLC28A2O43868 658 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 SEMA7AO75326 666 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 SERPINB7O75635 380 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 OR12D1P0DN82 309 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 POU2F1P14859 743 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 GPC1P35052 558 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 TGFBR2P37173 567 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 NCBP2P52298 156 aaKnown RBP eCLIP15.77■□□□□ 0.11
CCDC43-202ENST00000457422 C21orf59P57076 290 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 CLDN2P57739 230 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 LRRC32Q14392 662 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 PTGES3Q15185 160 aaKnown RBP15.77■□□□□ 0.11
CCDC43-202ENST00000457422 MTSS1LQ765P7 747 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 TMEM145Q8NBT3 493 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 UTP15Q8TED0 518 aaKnown RBP15.77■□□□□ 0.11
CCDC43-202ENST00000457422 SEMA3GQ9NS98 782 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 ZCCHC3Q9NUD5 404 aaKnown RBP15.77■□□□□ 0.11
CCDC43-202ENST00000457422 OR6C2Q9NZP2 312 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 CA5BQ9Y2D0 317 aa15.77■□□□□ 0.11
CCDC43-202ENST00000457422 TRBV4-1A0A0J9YWV2 114 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 A0A1W2PR48 441 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 POM121BA6NF01 834 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 FAM227AF5H4B4 570 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 MPZL2O60487 215 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 LCKP06239 509 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 ELAVL4P26378 380 aaKnown RBP15.76■□□□□ 0.11
CCDC43-202ENST00000457422 NDUFS1P28331 727 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 PTGER1P34995 402 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 SLC19A1P41440 591 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 KHKP50053 298 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 CRISP1P54107 249 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 CDC42P60953 191 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 DLX2Q07687 328 aaPredicted RBP15.76■□□□□ 0.11
CCDC43-202ENST00000457422 DGCR6Q14129 220 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 SYPL1Q16563 259 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 USP30Q70CQ3 517 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 OR5D16Q8NGK9 328 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 OR1E3Q8WZA6 343 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 VMP1Q96GC9 406 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 PLEKHA8Q96JA3 519 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 COL21A1Q96P44 957 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 BBS4Q96RK4 519 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 ITPAQ9BY32 194 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 BCL2L10Q9HD36 194 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 IMPAD1Q9NX62 359 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 SEC14L3Q9UDX4 400 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 TBC1D29Q9UFV1 150 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 TMCC3Q9ULS5 477 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 SNX7Q9UNH6 387 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 ATG4BQ9Y4P1 393 aa15.76■□□□□ 0.11
CCDC43-202ENST00000457422 FAAHO00519 579 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 EML2O95834 649 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 CHMP24386 653 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 PPP2R1BP30154 601 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 CTHP32929 405 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 ANXA11P50995 505 aaKnown RBP15.75■□□□□ 0.11
CCDC43-202ENST00000457422 ADAM15Q13444 863 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 ANKDD1AQ495B1 522 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 FRMPD2BQ6IN97 320 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 BHLHB9Q6PI77 547 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 BBS10Q8TAM1 723 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 SUN3Q8TAQ9 357 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 MIPOL1Q8TD10 442 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 MOAP1Q96BY2 351 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 RIPOR3Q96MK2 946 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 CD93Q9NPY3 652 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 KLF15Q9UIH9 416 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 CES1P1Q9UKY3 287 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 DUSP12Q9UNI6 340 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 MGAT4BQ9UQ53 548 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 F5P12259 2224 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 SH3D21A4FU49 640 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 M0R129 80 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 PGRMC2O15173 223 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 AIFM1O95831 613 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 H1F0P07305 194 aaKnown RBP15.75■□□□□ 0.11
CCDC43-202ENST00000457422 C21orf33P30042 268 aaPredicted RBP15.75■□□□□ 0.11
CCDC43-202ENST00000457422 CTSKP43235 329 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 SMIM11AP58511 58 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 CEBPEQ15744 281 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 RAB30Q15771 203 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 DCST1Q5T197 706 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 SLC48A1Q6P1K1 146 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 Q6ZNX1 250 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 AMIGO1Q86WK6 493 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 KRT73Q86Y46 540 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 SLC15A4Q8N697 577 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 OR4D11Q8NGI4 311 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 VANGL1Q8TAA9 524 aaPredicted RBP15.75■□□□□ 0.11
CCDC43-202ENST00000457422 SLC38A4Q969I6 547 aa15.75■□□□□ 0.11
CCDC43-202ENST00000457422 SIPA1Q96FS4 1042 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms