RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 DGAT2L6Q6ZPD8 337 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 ARMC10Q8N2F6 343 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 NR4A3Q92570 626 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 SCMH1Q96GD3 660 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 APIPQ96GX9 242 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 FBXL20Q96IG2 436 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 TRMOQ9BU70 441 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 EML4Q9HC35 981 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 TIMMDC1Q9NPL8 285 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 KLF13Q9Y2Y9 288 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 SERTM1A2A2V5 107 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 KLRC4-KLRK1H3BQV0 150 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 CTIFO43310 598 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 MYZAPP0CAP1 466 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 CSNK2A2P19784 350 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 ALDH6A1Q02252 535 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 ZNF844Q08AG5 666 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 HLA-DQA1Q5Y7H0 255 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 SLC48A1Q6P1K1 146 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 OPN5Q6U736 354 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 HOMEZQ8IX15 550 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 GALNT12Q8IXK2 581 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 GPALPP1Q8IXQ4 340 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 CDC26Q8NHZ8 85 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 PPP1R14CQ8TAE6 165 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 KLHL29Q96CT2 875 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 GAL3ST4Q96RP7 486 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 TRIM45Q9H8W5 580 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 DLGAP4Q9Y2H0 992 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 ESPL1Q14674 2120 aa16.78■□□□□ 0.28
PDLIM2-215ENST00000456545 HRKO00198 91 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 SLC28A1O00337 649 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 AZIN1O14977 448 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 NME2P1O60361 137 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 ANXA4P09525 319 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 CPMP14384 443 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 DRD2P14416 443 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 NME2P22392 152 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 TIA1P31483 386 aaKnown RBP eCLIP16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 FEN1P39748 380 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 SRSF11Q05519 484 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 HEPACAMQ14CZ8 416 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 SPRED3Q2MJR0 410 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 CLEC6AQ6EIG7 209 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 GFRALQ6UXV0 394 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 SLC22A8Q8TCC7 542 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 ZBTB9Q96C00 473 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 RASL10BQ96S79 203 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 MECRQ9BV79 373 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 EBPLQ9BY08 206 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 BRINP2Q9C0B6 783 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 GIMAP4Q9NUV9 329 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 SEC14L3Q9UDX4 400 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 OSGIN2Q9Y236 505 aa16.77■□□□□ 0.28
PDLIM2-215ENST00000456545 NBASA2RRP1 2371 aa16.77■□□□□ 0.27
PDLIM2-215ENST00000456545 TMEM200CA6NKL6 621 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 OR6C76A6NM76 312 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 RGS14O43566 566 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 NPHS1O60500 1241 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 SEC22BO75396 215 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 IL3P08700 152 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 CREB1P16220 341 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 SOX3P41225 446 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 RBPJQ06330 500 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 ZNF750Q32MQ0 723 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 TRIM46Q7Z4K8 759 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 MMP21Q8N119 569 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 NUBPLQ8TB37 319 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 C16orf78Q8WTQ4 265 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 ZIM3Q96PE6 472 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 SLX1AQ9BQ83 275 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 CXorf21Q9HAI6 301 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 KCNK9Q9NPC2 374 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 UTS2RQ9UKP6 389 aa16.76■□□□□ 0.27
PDLIM2-215ENST00000456545 C2orf92A0A1B0GVN3 265 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 A0A1W2PS29 197 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 PEX1O43933 1283 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 OR6B1O95007 311 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 UNC5CO95185 931 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 IGKV3-11P04433 115 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 NEFHP12036 1026 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 GSTM5P46439 218 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 RAE1P78406 368 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 C2orf80Q0P641 193 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 MPEG1Q2M385 716 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 PIGGQ5H8A4 983 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 ZNF324BQ6AW86 544 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 NUDCD3Q8IVD9 361 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 SULF2Q8IWU5 870 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 C9orf40Q8IXQ3 194 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 SAMD14Q8IZD0 417 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 BCAP29Q9UHQ4 241 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 CES1P1Q9UKY3 287 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 ENTPD4Q9Y227 616 aa16.75■□□□□ 0.27
PDLIM2-215ENST00000456545 CROCCQ5TZA2 2017 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 NPIPA5E9PKD4 350 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 RSL1D1O76021 490 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 BPGMP07738 259 aa16.74■□□□□ 0.27
PDLIM2-215ENST00000456545 MST1P26927 711 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms