RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 B4GALT7Q9UBV7 327 aa3.41□□□□□ -1.86
RBM39-220ENST00000455343 CIDEBQ9UHD4 219 aa3.41□□□□□ -1.86
RBM39-220ENST00000455343 FEZ2Q9UHY8 353 aaPredicted RBP3.41□□□□□ -1.86
RBM39-220ENST00000455343 LCMT1Q9UIC8 334 aa3.41□□□□□ -1.86
RBM39-220ENST00000455343 KLF13Q9Y2Y9 288 aaPredicted RBP3.41□□□□□ -1.86
RBM39-220ENST00000455343 PCDHGB3Q9Y5G1 929 aa3.41□□□□□ -1.86
RBM39-220ENST00000455343 GPR45Q9Y5Y3 372 aa3.41□□□□□ -1.86
RBM39-220ENST00000455343 BZW2Q9Y6E2 419 aaKnown RBP3.41□□□□□ -1.86
RBM39-220ENST00000455343 GTF3C1Q12789 2109 aa3.41□□□□□ -1.86
RBM39-220ENST00000455343 SVEP1Q4LDE5 3571 aa3.41□□□□□ -1.86
RBM39-220ENST00000455343 RTTNQ86VV8 2226 aa3.4□□□□□ -1.86
RBM39-220ENST00000455343 PINLYPA6NC86 204 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 KRT87PA6NCN2 255 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 DNAJC9-AS1A6NH13 148 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 CGB1A6NKQ9 187 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 RNF212BA8MTL3 300 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 MAGEB17A8MXT2 336 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 CLDN4O14493 209 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 TXNDC9O14530 226 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 BCKDKO14874 412 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 P2RX6O15547 441 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 OR1I1O60431 355 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 CDC40O60508 579 aaKnown RBP eCLIP3.4□□□□□ -1.87
RBM39-220ENST00000455343 CST8O60676 142 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 WDR1O75083 606 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 VPS26AO75436 327 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 ANXA9O76027 345 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 PDE9AO76083 593 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 GLSO94925 669 aaPredicted RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 C1orf105O95561 183 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 HRGP04196 525 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 ANXA5P08758 320 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 OR56A5P0C7T3 313 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 ERVK-10P10266 1014 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 IL10P22301 178 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 CEACAM8P31997 349 aaPredicted RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 CYLC1P35663 651 aaPredicted RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 RFC3P40938 356 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 CDKN2BP42772 138 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 XCR1P46094 333 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 TAS2R50P59544 299 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 MYL5Q02045 173 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 RHAGQ02094 409 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 PRDX1Q06830 199 aaKnown RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 TFDP2Q14188 446 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 CAPRIN1Q14444 709 aaKnown RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 NAA25Q14CX7 972 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 HYAL4Q2M3T9 481 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 CCSMST1Q4G0I0 132 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 SFT2D3Q587I9 215 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 Q5PR19 223 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 KCTD11Q693B1 232 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 VWA1Q6PCB0 445 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 C16orf47Q6ZP98 133 aaPredicted RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 ZNF788Q6ZQV5 615 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 RGS9BPQ6ZS82 235 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 TAS2R42Q7RTR8 314 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 PRSS41Q7RTY9 318 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 VN1R4Q7Z5H5 301 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 RFX6Q8HWS3 928 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 INTS1Q8N201 2190 aaKnown RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 KIF2BQ8N4N8 673 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 RELL2Q8NC24 303 aaPredicted RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 APCDD1LQ8NCL9 501 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 NAXEQ8NCW5 288 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 NFAM1Q8NET5 270 aaPredicted RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 OR51Q1Q8NH59 317 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 LKAAEAR1Q8TD35 194 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 CREB3L4Q8TEY5 395 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 STYXQ8WUJ0 223 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 ASZ1Q8WWH4 475 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 SYN2Q92777 582 aaPredicted RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 RNASE6Q93091 150 aaKnown RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 QKIQ96PU8 341 aaKnown RBP eCLIP3.4□□□□□ -1.876e-25■■■□□ 16.5
RBM39-220ENST00000455343 OR1F2PQ96R84 312 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 APOL2Q9BQE5 337 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 CARD6Q9BX69 1037 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 MAK16Q9BXY0 300 aaKnown RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 DEFB127Q9H1M4 99 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 GBA3Q9H227 469 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 DEPPQ9NTK1 212 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 SPATA7Q9P0W8 599 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 CTTNBP2NLQ9P2B4 639 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 RSPH14Q9UHP6 348 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 SLC39A10Q9ULF5 831 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 PPIEQ9UNP9 301 aaKnown RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 AAR2Q9Y312 384 aaKnown RBP3.4□□□□□ -1.87
RBM39-220ENST00000455343 NFS1Q9Y697 457 aa3.4□□□□□ -1.87
RBM39-220ENST00000455343 CCDC88CQ9P219 2028 aa3.39□□□□□ -1.87
RBM39-220ENST00000455343 NUP210LQ5VU65 1888 aa3.39□□□□□ -1.87
RBM39-220ENST00000455343 KCNE1BA0A087WTH5 132 aa3.39□□□□□ -1.87
RBM39-220ENST00000455343 IGKV3D-11A0A0A0MRZ8 115 aa3.39□□□□□ -1.87
RBM39-220ENST00000455343 CCDC151A5D8V7 595 aa3.39□□□□□ -1.87
RBM39-220ENST00000455343 MBD3L4A6NDZ8 208 aaPredicted RBP3.39□□□□□ -1.87
RBM39-220ENST00000455343 TRIM64A6NGJ6 449 aa3.39□□□□□ -1.87
RBM39-220ENST00000455343 OR51F1A6NGY5 319 aa3.39□□□□□ -1.87
RBM39-220ENST00000455343 TUBAL3A6NHL2 446 aa3.39□□□□□ -1.87
RBM39-220ENST00000455343 TRIM64BA6NI03 449 aa3.39□□□□□ -1.87
RBM39-220ENST00000455343 MBD3L5A6NJ08 208 aaPredicted RBP3.39□□□□□ -1.87
RBM39-220ENST00000455343 CLCA1A8K7I4 914 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms