RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 PIEZO1Q92508 2521 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 ZFHX4Q86UP3 3567 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 BBIP1A8MTZ0 92 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 TMX2-CTNND1H3BSU7 103 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 RNASET2O00584 256 aaKnown RBP10.3□□□□□ -0.76
SCN9A-205ENST00000454569 GYG2O15488 501 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 PDPK1O15530 556 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 CPNE3O75131 537 aaKnown RBP10.3□□□□□ -0.76
SCN9A-205ENST00000454569 STK17BO94768 372 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 TNFSF15O95150 251 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 GPR75O95800 540 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 DLGAP3O95886 979 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 CT62P0C5K7 136 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 NQO1P15559 274 aaKnown RBP10.3□□□□□ -0.76
SCN9A-205ENST00000454569 KCNJ2P63252 427 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 DCDP81605 110 aaKnown RBP10.3□□□□□ -0.76
SCN9A-205ENST00000454569 RHAGQ02094 409 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 HSPB3Q12988 150 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 RABL3Q5HYI8 236 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 LRIF1Q5T3J3 769 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 DCAF12Q5T6F0 453 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 MLIPQ5VWP3 458 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 OR52E8Q6IFG1 317 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 MRPL14Q6P1L8 145 aaKnown RBP10.3□□□□□ -0.76
SCN9A-205ENST00000454569 FAM111BQ6SJ93 734 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 ZNF517Q6ZMY9 492 aaPredicted RBP10.3□□□□□ -0.76
SCN9A-205ENST00000454569 OVCH1Q7RTY7 1134 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 TMPRSS7Q7RTY8 843 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 DHDDSQ86SQ9 333 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 TMPRSS12Q86WS5 348 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 SCUBE1Q8IWY4 988 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 DEFB107AQ8IZN7 70 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 OR4K14Q8NGD5 310 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 OR4A15Q8NGL6 344 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 OR9A2Q8NGT5 310 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 OR5AK3PQ8NH89 298 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 STT3BQ8TCJ2 826 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 KAT2AQ92830 837 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 ZNF764Q96H86 408 aaPredicted RBP10.3□□□□□ -0.76
SCN9A-205ENST00000454569 PRPF18Q99633 342 aaKnown RBP10.3□□□□□ -0.76
SCN9A-205ENST00000454569 BTBD10Q9BSF8 475 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 SOX17Q9H6I2 414 aaPredicted RBP10.3□□□□□ -0.76
SCN9A-205ENST00000454569 WDR41Q9HAD4 459 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 PRTFDC1Q9NRG1 225 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 CMTM6Q9NX76 183 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 AKAP7Q9P0M2 348 aaPredicted RBP10.3□□□□□ -0.76
SCN9A-205ENST00000454569 BTNL2Q9UIR0 455 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 CDC14AQ9UNH5 594 aa10.3□□□□□ -0.76
SCN9A-205ENST00000454569 NINQ8N4C6 2090 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 IGLV3-12A0A075B6K2 115 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 A0A096LPI6 279 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 RNF223E7ERA6 249 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 HRKO00198 91 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 RFXANKO14593 260 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 GSC2O15499 205 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 CTNSO60931 367 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 CDK4P11802 303 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 CPMP14384 443 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 SLC6A2P23975 617 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 TLX1P31314 330 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-205ENST00000454569 MSX2P35548 267 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-205ENST00000454569 RPL3P39023 403 aaKnown RBP10.29□□□□□ -0.76
SCN9A-205ENST00000454569 NCBP2P52298 156 aaKnown RBP eCLIP10.29□□□□□ -0.76
SCN9A-205ENST00000454569 MANFP55145 182 aaKnown RBP10.29□□□□□ -0.76
SCN9A-205ENST00000454569 MTPNP58546 118 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 PSME3P61289 254 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 MRPS35P82673 323 aaKnown RBP10.29□□□□□ -0.76
SCN9A-205ENST00000454569 MGAT2Q10469 447 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 SLC13A2Q13183 592 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 ART3Q13508 389 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 NKG7Q16617 165 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 RUNDC3AQ59EK9 446 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 OXLD1Q5BKU9 147 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 COQ5Q5HYK3 327 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 FAAH2Q6GMR7 532 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 NANOGP8Q6NSW7 305 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 FAM198BQ6UWH4 519 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 ZNF621Q6ZSS3 439 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 LANCL3Q6ZV70 420 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 ZNF595Q8IYB9 648 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 RNF148Q8N7C7 305 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 GOT1L1Q8NHS2 421 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-205ENST00000454569 STARD8Q92502 1023 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 TANKQ92844 425 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 ITCHQ96J02 903 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 PANX1Q96RD7 426 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 BBS4Q96RK4 519 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 DDA1Q9BW61 102 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 ALOXE3Q9BYJ1 711 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 VN1R1Q9GZP7 353 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 NANOGQ9H9S0 305 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 CLK4Q9HAZ1 481 aaKnown RBP10.29□□□□□ -0.76
SCN9A-205ENST00000454569 ATAD3AQ9NVI7 634 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 GPATCH2Q9NW75 528 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 CROTQ9UKG9 612 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.29□□□□□ -0.76
SCN9A-205ENST00000454569 DOCK10Q96BY6 2186 aa10.29□□□□□ -0.76
SCN9A-205ENST00000454569 IGKV3D-11A0A0A0MRZ8 115 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 DYTNA2CJ06 578 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 VSTM2BA6NLU5 285 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms