RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 RIN1Q13671 783 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 SLC1A5Q15758 541 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 EXT1Q16394 746 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 GPR157Q5UAW9 335 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 MRPL14Q6P1L8 145 aaKnown RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 RSPO2Q6UXX9 243 aaPredicted RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 KLBQ86Z14 1044 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 RASGRP3Q8IV61 690 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 SVOPQ8N4V2 548 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 PSMA8Q8TAA3 256 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 RDH11Q8TC12 318 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 NXNL1Q96CM4 212 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 RNFT2Q96EX2 444 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 SERAC1Q96JX3 654 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 CDRT15Q96T59 188 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 RBBP8Q99708 897 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 TBL1YQ9BQ87 522 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 CLPBQ9H078 707 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 SIRPDQ9H106 197 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 SYBUQ9NX95 663 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 HAO1Q9UJM8 370 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 SLC5A6Q9Y289 635 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 ATG2AQ2TAZ0 1938 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 A0A1B0GW15 77 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 A0A1W2PPV4 95 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 A0A1W2PQM1 296 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 WDR27A2RRH5 827 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 PRAMEF25A6NGN4 478 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 A8MUI8 341 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 CXorf49A8MYA2 514 aaPredicted RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 TCP11X1B4DZS4 312 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 PRAMEF26H0Y7S4 382 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 ANKRD28O15084 1053 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 PRICKLE3O43900 615 aaPredicted RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 PRAMEF4O60810 478 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 PRAMEF11O60813 436 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 MT-ND2P03891 347 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 RLN1P04808 185 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 CEACAM1P13688 526 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 RGS4P49798 205 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 ADORA2A-AS1P86434 159 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 PSMD5Q16401 504 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 ACTBL2Q562R1 376 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 PRAMEF5Q5TYX0 476 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 PRAMEF9Q5VWM5 478 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 PRAMEF6Q5VXH4 476 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 ANKS6Q68DC2 871 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 TTC33Q6PID6 262 aaPredicted RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 PID1Q7Z2X4 250 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 FAM122BQ7Z309 247 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 LONP2Q86WA8 852 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 OR9K2Q8NGE7 335 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 C10orf82Q8WW14 230 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 DNASE1L2Q92874 299 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 FBXO17Q96EF6 278 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 ZNF48Q96MX3 618 aaPredicted RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 INSM2Q96T92 566 aaPredicted RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 FAM96AQ9H5X1 160 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 LDAHQ9H6V9 325 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 ASB8Q9H765 288 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 NT5MQ9NPB1 228 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 HSPB7Q9UBY9 170 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 FAF1Q9UNN5 650 aaPredicted RBP7.39□□□□□ -1.23
BRCC3-208ENST00000453705 USH1CQ9Y6N9 552 aa7.39□□□□□ -1.23
BRCC3-208ENST00000453705 LOC285095A0A1B0GVY8 99 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 SMIM23A6NLE4 172 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 TRIM49D1C9J1S8 452 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 TRAFD1O14545 582 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-208ENST00000453705 POLR1CO15160 346 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-208ENST00000453705 LPXNO60711 386 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 AVILO75366 819 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 SPATA31D3P0C874 917 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 CA4P22748 312 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 MGAT1P26572 445 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 CD80P33681 288 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 SPRP35270 261 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-208ENST00000453705 PTDSS1P48651 473 aaKnown RBP7.38□□□□□ -1.23
BRCC3-208ENST00000453705 PGFP49763 221 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 CDH4P55283 916 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 ITGA1P56199 1179 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 MLF1P58340 268 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 ITGA9Q13797 1035 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 ENPP2Q13822 863 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 LIN52Q52LA3 116 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 TEDDM1Q5T9Z0 273 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 CDC73Q6P1J9 531 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 COLCA1Q6ZS62 124 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 SPATA31D4Q6ZUB0 917 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 GAREM2Q75VX8 874 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 SETD3Q86TU7 594 aaPredicted RBP7.38□□□□□ -1.23
BRCC3-208ENST00000453705 LAPTM4BQ86VI4 370 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 LNX2Q8N448 690 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 BPIFB1Q8TDL5 484 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 TCP10LQ8TDR4 215 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 FBLIM1Q8WUP2 373 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 MITD1Q8WV92 249 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 B3GALT6Q96L58 329 aa7.38□□□□□ -1.23
BRCC3-208ENST00000453705 CYP2S1Q96SQ9 504 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms