RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 C1GALT1Q9NS00 363 aa15.03■□□□□ -0
SNX17-204ENST00000453453 ASIC5Q9NY37 505 aa15.03■□□□□ -0
SNX17-204ENST00000453453 RUVBL1Q9Y265 456 aaKnown RBP15.03■□□□□ -0
SNX17-204ENST00000453453 AP1M2Q9Y6Q5 423 aa15.03■□□□□ -0
SNX17-204ENST00000453453 MDC1Q14676 2089 aaKnown RBP15.03■□□□□ -0
SNX17-204ENST00000453453 LOC100130705A0A1B0GUX0 176 aa15.03■□□□□ -0
SNX17-204ENST00000453453 B4GAT1O43505 415 aa15.03■□□□□ -0
SNX17-204ENST00000453453 LCMT2O60294 686 aaKnown RBP15.03■□□□□ -0
SNX17-204ENST00000453453 SEMA3DO95025 777 aa15.03■□□□□ -0
SNX17-204ENST00000453453 ACPPP15309 386 aa15.03■□□□□ -0
SNX17-204ENST00000453453 IL12AP29459 219 aa15.03■□□□□ -0
SNX17-204ENST00000453453 PCYT1AP49585 367 aa15.03■□□□□ -0
SNX17-204ENST00000453453 PPP5CP53041 499 aa15.03■□□□□ -0
SNX17-204ENST00000453453 PPP1CAP62136 330 aa15.03■□□□□ -0
SNX17-204ENST00000453453 PHC1P78364 1004 aa15.03■□□□□ -0
SNX17-204ENST00000453453 RGS1Q08116 209 aa15.03■□□□□ -0
SNX17-204ENST00000453453 CYP4F3Q08477 520 aa15.03■□□□□ -0
SNX17-204ENST00000453453 TCF15Q12870 199 aa15.03■□□□□ -0
SNX17-204ENST00000453453 KCNAB2Q13303 367 aa15.03■□□□□ -0
SNX17-204ENST00000453453 DPY19L1Q2PZI1 675 aa15.03■□□□□ -0
SNX17-204ENST00000453453 AMZ1Q400G9 498 aa15.03■□□□□ -0
SNX17-204ENST00000453453 TIGD2Q4W5G0 525 aa15.03■□□□□ -0
SNX17-204ENST00000453453 RFTN2Q52LD8 501 aaPredicted RBP15.03■□□□□ -0
SNX17-204ENST00000453453 FCRL6Q6DN72 434 aa15.03■□□□□ -0
SNX17-204ENST00000453453 PRR23CQ6ZRP0 262 aa15.03■□□□□ -0
SNX17-204ENST00000453453 FAM92BQ6ZTR7 304 aa15.03■□□□□ -0
SNX17-204ENST00000453453 VN1R5Q7Z5H4 357 aa15.03■□□□□ -0
SNX17-204ENST00000453453 ADCK1Q86TW2 530 aa15.03■□□□□ -0
SNX17-204ENST00000453453 ARMC8Q8IUR7 673 aa15.03■□□□□ -0
SNX17-204ENST00000453453 CARFQ8N187 725 aa15.03■□□□□ -0
SNX17-204ENST00000453453 ZNF655Q8N720 491 aaPredicted RBP15.03■□□□□ -0
SNX17-204ENST00000453453 C19orf47Q8N9M1 422 aaKnown RBP15.03■□□□□ -0
SNX17-204ENST00000453453 DYNC2LI1Q8TCX1 351 aa15.03■□□□□ -0
SNX17-204ENST00000453453 RERGQ96A58 199 aaPredicted RBP15.03■□□□□ -0
SNX17-204ENST00000453453 TMEM74Q96NL1 305 aa15.03■□□□□ -0
SNX17-204ENST00000453453 TGM7Q96PF1 710 aa15.03■□□□□ -0
SNX17-204ENST00000453453 ZFYVE21Q9BQ24 234 aa15.03■□□□□ -0
SNX17-204ENST00000453453 MS4A8Q9BY19 250 aa15.03■□□□□ -0
SNX17-204ENST00000453453 AMBRA1Q9C0C7 1298 aa15.03■□□□□ -0
SNX17-204ENST00000453453 KLHL25Q9H0H3 589 aa15.03■□□□□ -0
SNX17-204ENST00000453453 NCDNQ9UBB6 729 aa15.03■□□□□ -0
SNX17-204ENST00000453453 KLHL3Q9UH77 587 aa15.03■□□□□ -0
SNX17-204ENST00000453453 IFT52Q9Y366 437 aa15.03■□□□□ -0
SNX17-204ENST00000453453 FLRT2O43155 660 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 SH3BGRLO75368 114 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 PRKD3O94806 890 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 PRPS2P11908 318 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 MYF5P13349 255 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 PVRP15151 417 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 LSSP48449 732 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 MAPK10P53779 464 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 TUBA1BP68363 451 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 KRR1Q13601 381 aaKnown RBP15.02□□□□□ -0.01
SNX17-204ENST00000453453 KEAP1Q14145 624 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 ZNF181Q2M3W8 571 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 CTU2Q2VPK5 515 aaKnown RBP15.02□□□□□ -0.01
SNX17-204ENST00000453453 TMEM35AQ53FP2 167 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 KHDRBS2Q5VWX1 349 aaKnown RBP15.02□□□□□ -0.01
SNX17-204ENST00000453453 NKAIN2Q5VXU1 208 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 SLX4IPQ5VYV7 408 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 GUSBP11Q6P575 273 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 TUBA1AQ71U36 451 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 P2RY8Q86VZ1 359 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 PROKR1Q8TCW9 393 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 SLC47A1Q96FL8 570 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 APIPQ96GX9 242 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 DACH2Q96NX9 599 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 ZNF300Q96RE9 604 aaPredicted RBP15.02□□□□□ -0.01
SNX17-204ENST00000453453 OR51B5Q9H339 312 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 DUSP21Q9H596 190 aa15.02□□□□□ -0.01
SNX17-204ENST00000453453 NDUFS4O43181 175 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 NADKO95544 446 aaPredicted RBP15.01□□□□□ -0.01
SNX17-204ENST00000453453 ETHE1O95571 254 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 OXSR1O95747 527 aaPredicted RBP15.01□□□□□ -0.01
SNX17-204ENST00000453453 CST1P01037 141 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 GSNP06396 782 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 SLC35G6P0C7Q6 338 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 CKMT1AP12532 417 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 BMP4P12644 408 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 ST6GAL1P15907 406 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 UGT2B10P36537 528 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 STXBP1P61764 594 aaKnown RBP15.01□□□□□ -0.01
SNX17-204ENST00000453453 TGM3Q08188 693 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 KCNJ8Q15842 424 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 MEP1AQ16819 746 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 LAIR2Q6ISS4 152 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 WDR74Q6RFH5 385 aaPredicted RBP15.01□□□□□ -0.01
SNX17-204ENST00000453453 CYP20A1Q6UW02 462 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 RNF44Q7L0R7 432 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 PAGE2Q7Z2X7 111 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 ASPGQ86U10 573 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 LIX1Q8N485 282 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 C1orf52Q8N6N3 182 aaKnown RBP15.01□□□□□ -0.01
SNX17-204ENST00000453453 GLB1L3Q8NCI6 653 aaPredicted RBP15.01□□□□□ -0.01
SNX17-204ENST00000453453 ZFP90Q8TF47 636 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 CHTF18Q8WVB6 975 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 HPS1Q92902 700 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 RGMAQ96B86 450 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 TCTN2Q96GX1 697 aa15.01□□□□□ -0.01
SNX17-204ENST00000453453 TEX37Q96LM6 180 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms