RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 JSRP1Q96MG2 331 aaPredicted RBP13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 KRT12Q99456 494 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 SFXN3Q9BWM7 321 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 WWTR1Q9GZV5 400 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 RPF2Q9H7B2 306 aaKnown RBP13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 SNX15Q9NRS6 342 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 WWOXQ9NZC7 414 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 ASIC3Q9UHC3 531 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 VPS13CQ709C8 3753 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 EEF1E1-BLOC1S5C9J1V9 151 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 EEF1E1O43324 174 aaKnown RBP13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 ERN1O75460 977 aaKnown RBP13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 ACTL6AO96019 429 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 BUD31P41223 144 aaPredicted RBP13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 SSR2P43308 183 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 TRPC1P48995 793 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 SLC12A2P55011 1212 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 ATP6V0D1P61421 351 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 PCDH1Q08174 1060 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 MGAT5Q09328 741 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 MORF4L2Q15014 288 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 EBPQ15125 230 aaKnown RBP13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 KCTD19Q17RG1 926 aaPredicted RBP13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 MSS51Q4VC12 460 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 LRRC70Q7Z2Q7 622 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 UBE3DQ7Z6J8 389 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 LAS2Q8IYD9 372 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 ZCCHC7Q8N3Z6 543 aaKnown RBP13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 SPC24Q8NBT2 197 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 PDPRQ8NCN5 879 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 C17orf47Q8NEP4 570 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 SPATA3Q8NHX4 192 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 ACTRT1Q8TDG2 376 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 ZNF473Q8WTR7 871 aaKnown RBP13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 DIO2Q92813 273 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 CMTM7Q96FZ5 175 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 CAPZA3Q96KX2 299 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 TM9SF2Q99805 663 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 TMEM79Q9BSE2 394 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 ANGPTL4Q9BY76 406 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 RHOJQ9H4E5 214 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 ZNF395Q9H8N7 513 aaPredicted RBP13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 PLAC1Q9HBJ0 212 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 SLC17A6Q9P2U8 582 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 C15orf41Q9Y2V0 281 aa13.09□□□□□ -0.31
LYSMD3-202ENST00000453259 ELK3P41970 407 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 PGGT1BP53609 377 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 NRG3P56975 720 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 SLC37A1P57057 533 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 TAS2R39P59534 338 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 POU4F1Q01851 419 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 TNFRSF17Q02223 184 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 IRF8Q02556 426 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 KHDRBS2Q5VWX1 349 aaKnown RBP13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 MED27Q6P2C8 311 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 TMEM81Q6P7N7 255 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 TRMT10BQ6PF06 316 aaKnown RBP13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 GPR180Q86V85 440 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 CXorf67Q86X51 503 aaPredicted RBP13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 GPSM1Q86YR5 675 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 IGDCC3Q8IVU1 814 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 SNX31Q8N9S9 440 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 ANKRD49Q8WVL7 239 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 DTNBP1Q96EV8 351 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 TSPAN17Q96FV3 270 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 TMEM41AQ96HV5 264 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 UCN2Q96RP3 112 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 GAL3ST4Q96RP7 486 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 SMR3AQ99954 134 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 BDH2Q9BUT1 245 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 PIGMQ9H3S5 423 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 NDRG3Q9UGV2 375 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 EIF3LQ9Y262 564 aaKnown RBP13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 TSC22D4Q9Y3Q8 395 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 TEX264Q9Y6I9 313 aa13.08□□□□□ -0.32
LYSMD3-202ENST00000453259 FN1P02751 2386 aaKnown RBP13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 NCF1BA6NI72 391 aaPredicted RBP13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 NCF1CA8MVU1 366 aaPredicted RBP13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 CASKO14936 926 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 TAPBPO15533 448 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 OR10H2O60403 315 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 PRAMEF4O60810 478 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 BANF1O75531 89 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 TRAPPC6AO75865 159 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 GPR75O95800 540 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 TMIGD3P0DMS9 266 aaPredicted RBP13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 NCF1P14598 390 aaPredicted RBP13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 CPN1P15169 458 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 CD22P20273 847 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 PIK3CBP42338 1070 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 MASP1P48740 699 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 ID2Q02363 134 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 CHIT1Q13231 466 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 GAB1Q13480 694 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 Q5PR19 223 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 PRAMEF9Q5VWM5 478 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 OR4C11Q6IEV9 310 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 ADNP2Q6IQ32 1131 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 P3H2Q8IVL5 708 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 ZNF441Q8N8Z8 693 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms