RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 GAGE12GP0CL81 117 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 GAGE12IP0CL82 117 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 MCF2P10911 925 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 KCNE1P15382 129 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 GM2AP17900 193 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 MNDAP41218 407 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 PRPHP41219 470 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 BRCC3P46736 316 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ARCN1P48444 511 aaKnown RBP3.97□□□□□ -1.77
LINC00393-202ENST00000452852 GAGE1Q13065 139 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 GAGE4Q13068 117 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 PLD1Q13393 1074 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 GTF2H2Q13888 395 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ZNF234Q14588 700 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 KYAT1Q16773 422 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 TDRD12Q587J7 1177 aaKnown RBP3.97□□□□□ -1.77
LINC00393-202ENST00000452852 SPDYCQ5MJ68 293 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 CYP4A22Q5TCH4 519 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 TPGS2Q68CL5 300 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ZNF324BQ6AW86 544 aaPredicted RBP3.97□□□□□ -1.77
LINC00393-202ENST00000452852 SLC8B1Q6J4K2 584 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 GTF2H2CQ6P1K8 395 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 RHBDF2Q6PJF5 856 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 GFRALQ6UXV0 394 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 WDR88Q6ZMY6 472 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ZNF704Q6ZNC4 412 aaPredicted RBP3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ASB18Q6ZVZ8 466 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 TMEM219Q86XT9 240 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 TMEM139Q8IV31 216 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 MMD2Q8IY49 270 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 LGI2Q8N0V4 545 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 RYBPQ8N488 228 aaPredicted RBP3.97□□□□□ -1.77
LINC00393-202ENST00000452852 LMNTD1Q8N9Z9 388 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 LEMD2Q8NC56 503 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 CLEC18CQ8NCF0 446 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ZNF461Q8TAF7 563 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ITFG1Q8TB96 612 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 CCDC107Q8WV48 283 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 CKAP2Q8WWK9 683 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ELSPBP1Q96BH3 223 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 TMEM19Q96HH6 336 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 OR1F2PQ96R84 312 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ZFP14Q9HCL3 533 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 POLD4Q9HCU8 107 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 RAB23Q9ULC3 237 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 AURKCQ9UQB9 309 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 KLK4Q9Y5K2 254 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 R4GN57 208 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 OBSL1O75147 1896 aa3.96□□□□□ -1.77
LINC00393-202ENST00000452852 LAMA1P25391 3075 aa3.96□□□□□ -1.77
LINC00393-202ENST00000452852 IGLV5-52A0A0A0MRZ9 124 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 A0A0B4J203 849 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 PP2D1A8MPX8 630 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 E9PI62 339 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 E9PMD0 336 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 F8VVB4 439 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 F8VWA3 439 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 CCL24O00175 119 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 KCNJ13O60928 360 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 HSF2BPO75031 334 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 TOM1L1O75674 476 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 PAPSS2O95340 614 aaPredicted RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 TRIM16O95361 564 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 EDN1P05305 212 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 FAM106CPP0CH98 169 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 CXCL8P10145 99 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 CEBPBP17676 345 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 U2AF2P26368 475 aaKnown RBP eCLIP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 GDI1P31150 447 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 IER3P46695 156 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 TKTL1P51854 596 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 THOP1P52888 689 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 DSCR9P59020 149 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 SRP54P61011 504 aaKnown RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 CSTF1Q05048 431 aaKnown RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 SULT2A1Q06520 285 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 TWF1Q12792 350 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 MYBPHQ13203 477 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 INAQ16352 499 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 WSCD2Q2TBF2 565 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 ZNF528Q3MIS6 628 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 XKR4Q5GH76 650 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 PM20D1Q6GTS8 502 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 FAM171BQ6P995 826 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 ZNF852Q6ZMS4 543 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 MARK2Q7KZI7 788 aaKnown RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 ADAMTSL2Q86TH1 951 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 ADCK1Q86TW2 530 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 SATL1Q86VE3 508 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 EXOC3L1Q86VI1 746 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 TMEM126BQ8IUX1 230 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 BATF2Q8N1L9 274 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 C4orf32Q8N8J7 132 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 ZNF540Q8NDQ6 660 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 IPMKQ8NFU5 416 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 OLIG1Q8TAK6 271 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 C18orf25Q96B23 403 aaPredicted RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 TMEM186Q96B77 213 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 PGM2Q96G03 612 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 MSANTD3Q96H12 275 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms