RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CHAF1BQ13112 559 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 STX5Q13190 355 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 SERTAD2Q14140 314 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 CPZQ66K79 652 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 PAPD4Q6PIY7 484 aaKnown RBP12.19□□□□□ -0.46
VPS33A-202ENST00000451053 C19orf48Q6RUI8 117 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 DGAT2L6Q6ZPD8 337 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 R3HCC1LQ7Z5L2 792 aaKnown RBP12.19□□□□□ -0.46
VPS33A-202ENST00000451053 YTHDF3Q7Z739 585 aaKnown RBP12.19□□□□□ -0.46
VPS33A-202ENST00000451053 TICAM1Q8IUC6 712 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 KRTCAP2Q8N6L1 136 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 NUDT8Q8WV74 236 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 SNRNP27Q8WVK2 155 aaKnown RBP12.19□□□□□ -0.46
VPS33A-202ENST00000451053 THAP4Q8WY91 577 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 EXOSC8Q96B26 276 aaKnown RBP12.19□□□□□ -0.46
VPS33A-202ENST00000451053 NSL1Q96IY1 281 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 PRPF18Q99633 342 aaKnown RBP12.19□□□□□ -0.46
VPS33A-202ENST00000451053 SLC25A23Q9BV35 468 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 REEP4Q9H6H4 257 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 MIEF1Q9NQG6 463 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 EHD3Q9NZN3 535 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 CCDC167Q9P0B6 97 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 TAGLN3Q9UI15 199 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 MAN2B2Q9Y2E5 1009 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 CHD8Q9HCK8 2581 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 ASPMQ8IZT6 3477 aa12.19□□□□□ -0.46
VPS33A-202ENST00000451053 NSG1A0A0A6YYJ2 146 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 BBIP1A8MTZ0 92 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 ANKRD28O15084 1053 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 SCAMP2O15127 329 aaKnown RBP12.18□□□□□ -0.46
VPS33A-202ENST00000451053 HPP00738 406 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 SNRPB2P08579 225 aaKnown RBP12.18□□□□□ -0.46
VPS33A-202ENST00000451053 COX4I1P13073 169 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 CPMP14384 443 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 PTGER1P34995 402 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 FEN1P39748 380 aaKnown RBP12.18□□□□□ -0.46
VPS33A-202ENST00000451053 STT3AP46977 705 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 RASSF2P50749 326 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 XKP51811 444 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 NME5P56597 212 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 UFM1P61960 85 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 PLIN5Q00G26 463 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 Q0VFX4 171 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 PDE7AQ13946 482 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 CYLC2Q14093 348 aaPredicted RBP12.18□□□□□ -0.46
VPS33A-202ENST00000451053 ZNF385BQ569K4 471 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 DCAF10Q5QP82 559 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 PAOXQ6QHF9 649 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 ZNF771Q7L3S4 317 aaPredicted RBP12.18□□□□□ -0.46
VPS33A-202ENST00000451053 NDUFAF7Q7L592 441 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 TREML1Q86YW5 311 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 DOK4Q8TEW6 326 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 PPWD1Q96BP3 646 aaKnown RBP12.18□□□□□ -0.46
VPS33A-202ENST00000451053 TESCQ96BS2 214 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 MTERF3Q96E29 417 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 CNRIP1Q96F85 164 aaPredicted RBP12.18□□□□□ -0.46
VPS33A-202ENST00000451053 VPS50Q96JG6 964 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 IMMP1LQ96LU5 166 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 ZNF681Q96N22 645 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 PRORYQ9H606 182 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 ZNF160Q9HCG1 818 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 ADAP2Q9NPF8 381 aa12.18□□□□□ -0.46
VPS33A-202ENST00000451053 SAGE2PA6NJ88 616 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 GABRR3A8MPY1 467 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 NR5A2O00482 541 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 ANGPT2O15123 496 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 CFLARO15519 480 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 OR10H2O60403 315 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 TBX19O60806 448 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 IL6P05231 212 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 CELA2AP08217 269 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 SLC35E2P0CK97 266 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 PORP16435 677 aaPredicted RBP12.17□□□□□ -0.46
VPS33A-202ENST00000451053 POLR2JP52435 117 aaKnown RBP12.17□□□□□ -0.46
VPS33A-202ENST00000451053 SRSF11Q05519 484 aaKnown RBP12.17□□□□□ -0.46
VPS33A-202ENST00000451053 BNIP1Q12981 228 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 RCAN2Q14206 197 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 ELAVL1Q15717 326 aaKnown RBP12.17□□□□□ -0.46
VPS33A-202ENST00000451053 MPEG1Q2M385 716 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 COL28A1Q2UY09 1125 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 COQ5Q5HYK3 327 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 BLOC1S3Q6QNY0 202 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 SNX32Q86XE0 403 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 RIMKLAQ8IXN7 391 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 ST13P4Q8IZP2 240 aaPredicted RBP12.17□□□□□ -0.46
VPS33A-202ENST00000451053 NATD1Q8N6N6 113 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 NFAM1Q8NET5 270 aaPredicted RBP12.17□□□□□ -0.46
VPS33A-202ENST00000451053 OR7A2PQ8NGA2 310 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 PTPMT1Q8WUK0 201 aaPredicted RBP12.17□□□□□ -0.46
VPS33A-202ENST00000451053 PPCDCQ96CD2 204 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 SPDL1Q96EA4 605 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 ZNF764Q96H86 408 aaPredicted RBP12.17□□□□□ -0.46
VPS33A-202ENST00000451053 DGAT2Q96PD7 388 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 LPAR4Q99677 370 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 CLMPQ9H6B4 373 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 SLC35C2Q9NQQ7 365 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 ATAD3AQ9NVI7 634 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 ARL8BQ9NVJ2 186 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 TAS2R7Q9NYW3 318 aa12.17□□□□□ -0.46
VPS33A-202ENST00000451053 ATP6V1HQ9UI12 483 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms